Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01690 ATGGCTATGTCTTCCACCACCACCACAGTATGCATCCCTGCTAAGAACATTCCAACCCCTCAACCACCAAAATTCGGTTTCTCAAACACCATCGCTTTTACTGTGAAACCGCGTAGATCACTACGCATCAGAAACTCCTCATCCGAGACCTCAAACACAGAGGTTGAATCAGAGAGTTCCATCGAAGTTCCAAAAGAACCGCCATCTTTGATTTCTTCTGCTAACGTCGAAAGAATTCTCCGCGGCTTACCAATTACAGATGCGGATCATTATGGTAGGCTAGGTGTTCCTAGAGGATGTCCCTTTGACATGGTGGGGGTTGCGTATAACATCAAGGTTCAAGAATTGAAGAGTCAGAATTTAGAGGAGGAGGAACTAGAGAAGAAATTGGAACTTCTGAAAGAATCGTACACTATTCTGTCATCGGAAGAAGAAAGAAGAATATACGACTGGAGCTTGGCGAGAGTGGAGAATAGAGAGGAATTCGTTTGGCCGTTCGAGGTTGACATAACACAGACAAAAGTTCCAAAAGAAGATCCTCCACCACAGGAACCCGAGGATGTTGGACCAACTAGAGTGGTTGGATATTTTATATTGGGATGGGTAATGTTGTCGTTTGTGTTATCTATTGCACTAAACTTATGA 645 0.4372 MAMSSTTTTVCIPAKNIPTPQPPKFGFSNTIAFTVKPRRSLRIRNSSSETSNTEVESESSIEVPKEPPSLISSANVERILRGLPITDADHYGRLGVPRGCPFDMVGVAYNIKVQELKSQNLEEEELEKKLELLKESYTILSSEEERRIYDWSLARVENREEFVWPFEVDITQTKVPKEDPPPQEPEDVGPTRVVGYFILGWVMLSFVLSIALNL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01690 214 Coils Coil 109 143 - -
Cca03g01690 214 MobiDBLite consensus disorder prediction 42 58 - -
Cca03g01690 214 Gene3D DnaJ domain 85 162 IPR036869 -
Cca03g01690 214 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 214 IPR044199 GO:0009535|GO:0010598
Cca03g01690 214 MobiDBLite consensus disorder prediction 42 67 - -
Cca03g01690 214 SUPERFAMILY Chaperone J-domain 88 155 IPR036869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01690 K23052 - gmx:100793741 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01690 03 36038795 36041129 Cca03g01690 03 36038795 36041129 ECH