Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01678 ATGTGTTCTGAAGCAACAATGGCAAAAACCATGACCCTGTGGTATCTTTTGCTCACTCTTTCCTTCGTTTATGCTGCCACTGCTAATACTCAAATCAAAATTACTAATAATCCTGCGGACAAGTTGGTAGCTGCGATTAACGAAAACAGAACTGCTCACAAAGTATCAACTTTAACCGACAACCCAGGGCTTGCATGTATTGCTCTACAATACATCAAGGCATACCAAGGTGATTGTGATGCTGTGGGTGGCCCTGATGGCAAGAAACCTCCAGAATCTCAATTTGCTGAAGTTTTTGCCCCAAACTGTGGTGTTGAGGCCACAACTCTTGCTCCTATAACTGGTCGTTTCCTGGGGTGCCAGTCTGATTATGTCCATGCACCTCAGGCATTTTCTGAAATCCTCATAAGGAACCAAAAGAGCTTAGACATACTCTACAGTAAGAACCACACTCAGCTTGGTGCTGCTGTCACAGGTACTGATGGAGGGTCACCTTATTTCTGGTGTGTGTTGTTTAGCAGTGGTAAGCCTAACAAAACTTTTACTTTTGAGAGTGGTGTGGCTAAGATAACAAAACCTGGTTGCTTTAGTGGGGCAAATGATGAGTGCAGTGGTGCTAGTGATTGGTCACCACTCAGTGGAATATGGCTATTTGCCACTTCGGTTCTGATTGCAATGGGGCTTGCTTATTATGATCATAAACAGATAAATTGTATGATCTCCACTTGA 729 0.4348 MCSEATMAKTMTLWYLLLTLSFVYAATANTQIKITNNPADKLVAAINENRTAHKVSTLTDNPGLACIALQYIKAYQGDCDAVGGPDGKKPPESQFAEVFAPNCGVEATTLAPITGRFLGCQSDYVHAPQAFSEILIRNQKSLDILYSKNHTQLGAAVTGTDGGSPYFWCVLFSSGKPNKTFTFESGVAKITKPGCFSGANDECSGASDWSPLSGIWLFATSVLIAMGLAYYDHKQINCMIST 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01678 242 PANTHER OS08G0459300 PROTEIN 12 229 - -
Cca03g01678 242 SUPERFAMILY PR-1-like 35 187 IPR035940 -
Cca03g01678 242 PANTHER OS08G0459300 PROTEIN 12 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01678 Cca-Chr3 35914981 35917863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01678 - - ccaj:109816134 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01678 03 35914981 35917863 Cca03g01678 03 35914981 35917863 ECH