Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01676 ATGGGTGTGAACAGTAACACTAATGAGAGCTCAACCGAGAAGGTTTCAAAATGTTGGGGAAATGCTCAAATGCCCTTTGCACTTCCATTTCTGACACCCCCCAACTTGAGCTTCACCACACCTCACCAACTCCACACCACCATCGCCACTGCTGCAGACAATTTATTCACATTTGTAGCCTCCCTCGCTTCTCAAAACCCTCTCCTCTCTCTCCCCTCCCAATTTCACGCCCTATGCCTCCAGATTCGGAAGCACAGAAACGTGACGTCGCTGTCTAGTCATAATTTCGCTGCCGTTTTACCCGGGGATTCGGTGGCGGGGGTGGTGGTGGCTAATGGGGTTCAGAATTTCTTGCAAATTTACAACACCTTGCTCATCGTTAGGCTCGTTTTGACGTGGTTTCCCAACACTCCTCCTTCCATCGTTAGTCCCTTCAGCACCATATGTGATCCATATCTGAACATATTCCGAGGAATTATTCCCCCTCTGGGAGGAACGTTGGATCTCTCTCCCATCCTAGCATTCTTGGTCCTAAATGCATTCACTAGCAGTGCTGCTGCACTCTCTGCTGAGCTTCCACCCACAGAACAATTCCAACAACCTCTTTCAGCACCGTTACACTCTACTACTTCGCAGATGAAATGGATGAGACGCCTTCTAGGGAACAGGTCTAAGATATCCGGTGATGCTAAATAG 696 0.4885 MGVNSNTNESSTEKVSKCWGNAQMPFALPFLTPPNLSFTTPHQLHTTIATAADNLFTFVASLASQNPLLSLPSQFHALCLQIRKHRNVTSLSSHNFAAVLPGDSVAGVVVANGVQNFLQIYNTLLIVRLVLTWFPNTPPSIVSPFSTICDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSSAAALSAELPPTEQFQQPLSAPLHSTTSQMKWMRRLLGNRSKISGDAK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01676 231 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 225 - -
Cca03g01676 231 Pfam YGGT family 117 180 IPR003425 GO:0016020
Cca03g01676 231 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 42 225 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01676 Cca-Chr3 35908999 35910609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01676 K02221 - gmx:100802756 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01676 03 35908999 35910609 Cca03g01676 03 35908999 35910609 ECH