Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01670 ATGCCTTCGTCATTTAGCCTGATGTTCATGTACACGGGGCACATCCGGCGGGCGTTCACGGGGGCGGGGCTGTTGTCGCAGACGCTGAGAGTGGACGAGGAAACGACGATGCACTTTTGGGGCCCAAAAAGCGAAATGGCGGAAAAGGGTTACCTGGTGCTGATCCACGGGTTTGGGCCTAGCGCGACGTGGCAGTGGCGTCGGCAGGTGAAGTTCCTGGCCCCACACTTCAACGTGTACGTTCCGGACCTAGTGTTCTTCGGAGGCTCCACCACCAAGTCGAGGGAGAGGAGCGAGGTGTTTCAAGCAGAGTCGGTGGGGAAGCTTGTGGACAAATTGGGTGTCCACAAGTTCCACGTGGTGGGCACCAGCTACGGGGGCATCGTCGCTTATAACTTGGCCAAGATCTTGGGGGAAGACAGGGTCCACAAAGTTGTTCTTGCTAGCTCCGGTCTCAACATGACTATTTCTAGCAACGTTCACATGGTGCATGCTGCTCAATTCAACAACATTGAGGAACTCATGCTCCCTAGTACTCCCCAACATCTCCGTAAATTGATGTCCCTCTCCATCCACAAACCTGCCCAAAGGGTCCCCGATTTCATCCTCAAAGACTTCTTAGACGAATTATACGGTGAAAATAGGAAGGAAAAAGTTGAGCTTCTAAACGGGATTACCATCGGAAGGGATCAAACTTCACACATCTCACCTCTTTCCCAGGAGGTTCTTATAGTCTGGGGGGATCAAGACAAAATATTTCCCGTGCAATTAGCCTATGAACTCAAAGAGATAATATGTGAAAACGCAAAACTGGAATTGATAAAGGATGCATCACATATGCCTCAAATGGAAAAGCCACGAGAGTTCAACAACATTCTTCTCAAATTCTTGCAGGAGCACTCTTGA 906 0.5022 MPSSFSLMFMYTGHIRRAFTGAGLLSQTLRVDEETTMHFWGPKSEMAEKGYLVLIHGFGPSATWQWRRQVKFLAPHFNVYVPDLVFFGGSTTKSRERSEVFQAESVGKLVDKLGVHKFHVVGTSYGGIVAYNLAKILGEDRVHKVVLASSGLNMTISSNVHMVHAAQFNNIEELMLPSTPQHLRKLMSLSIHKPAQRVPDFILKDFLDELYGENRKEKVELLNGITIGRDQTSHISPLSQEVLIVWGDQDKIFPVQLAYELKEIICENAKLELIKDASHMPQMEKPREFNNILLKFLQEHS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01670 301 SUPERFAMILY alpha/beta-Hydrolases 38 299 IPR029058 -
Cca03g01670 301 Pfam alpha/beta hydrolase fold 52 286 IPR000073 -
Cca03g01670 301 Gene3D alpha/beta hydrolase 13 301 IPR029058 -
Cca03g01670 301 PRINTS Alpha/beta hydrolase fold signature 76 91 IPR000073 -
Cca03g01670 301 PRINTS Alpha/beta hydrolase fold signature 120 133 IPR000073 -
Cca03g01670 301 PRINTS Alpha/beta hydrolase fold signature 242 256 IPR000073 -
Cca03g01670 301 PRINTS Epoxide hydrolase signature 57 75 IPR000639 GO:0003824
Cca03g01670 301 PRINTS Epoxide hydrolase signature 120 133 IPR000639 GO:0003824
Cca03g01670 301 PRINTS Epoxide hydrolase signature 274 296 IPR000639 GO:0003824
Cca03g01670 301 PANTHER SI:DKEY-122A22.2 5 297 - -
Cca03g01670 301 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01670 Cca-Chr3 35821954 35823547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01670 52 297 Acyl Lipid Metabolism Gene Families AT3G10840 24.367 1.53e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01670 - - gmx:100812356 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01670 03 35821954 35823547 Cca03g01670 03 35821954 35823547 ECH