Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01665 ATGCACCATACATCACTCCTACTTGTGCTTTTCTGCGGACCGATAATTAATTGCTCACTCGGATATACATTTTATCATCATAATTTCCATTTAATTGCATTGCCTAATATCCTCGGACAAGGTGAAAGGTGTAATGGCAGCGACGGAGAAGACTGTGACGGCAACGGATGCGGAGGCTGTGTGGTCGTGAAGGAAGAGGGTTTGAAGTTAAAAGATGATGATGTTAGCACCGATGAAGCATTGAAGCGCCACATGAAGTTCAGATCTTCTACTTCCAGTCCTCCCAACAAACCCACCCTTGACTTGATTCTCGCAGTGAAGCACCTTCTATTTCGCTCTTTGGATTCTCCTAGGAAGGATTCTTTCACCTTTTCGTCACTTTCTACATCCCGCACATGTTTTTCACCTGGATCCTCAAAGGGAGAGCCACAATCTGAGAATAGAGAGCTACCCCTTTCATCCTCAGTGATCTATGGTATCCTATGTTACGCCACGCTGCTAACTAGCCTCAAAACAAATTAG 522 0.4464 MHHTSLLLVLFCGPIINCSLGYTFYHHNFHLIALPNILGQGERCNGSDGEDCDGNGCGGCVVVKEEGLKLKDDDVSTDEALKRHMKFRSSTSSPPNKPTLDLILAVKHLLFRSLDSPRKDSFTFSSLSTSRTCFSPGSSKGEPQSENRELPLSSSVIYGILCYATLLTSLKTN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01665 173 Pfam Protein of unknown function (DUF1677) 57 112 IPR012876 -
Cca03g01665 173 PANTHER OS01G0745000 PROTEIN 57 146 IPR012876 -
Cca03g01665 173 MobiDBLite consensus disorder prediction 123 148 - -
Cca03g01665 173 PANTHER DUF1677 FAMILY PROTEIN 57 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01665 Cca-Chr3 35777748 35778991 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01665 - - gmx:100817156 142.895