Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01664 ATGAACTTGTCCAAGAAAGTGTCCCAAACGGATGCAAAGCTATTAAGCCCAAGCAAGGCAACAACTCTGAATCCAAATGCAGCAGAATTTATTCCTTTTTCCCTCAGATCATTATCTGGAACTACCAGCTCGGTAGATACTACAGCAACGCTTACTGCTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCCATTTCAAATAATTCCGATGATGAGGTGCACCAATACTGGCGGTGTCGGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAGTCTCGAGGTCTTGATGATCTTTCTTTAGCAGGTTTATCCATACATGATGACAATGAAGCCTCCAGGTTTCCTTCTTCTAAAGGAAGTAAATTTATAATAAATGGGCAGGAGGAAAAATCTCAACAGCATATTAATGGCAATAGCTTTGCAGATAAATTAAGGTTTTCCAATTCAAGCTACAGGGAGGACCCGTCTTCTGCAAGCTTTTTGAATGCTATGGCAAAGCCTTGGGATAGGGCAATTGGGAGTGCTGACCAGCATATTAGCTGTGTGCAAGAGGGGCTTACTTATGATGACAACTCTAGCCATGGATATTTAAATGATGTTTTGGCTGAAAATGCAATTGTGGATGATACTGATTTGAATCCTTTGGAGTTTTTAGCTTCTTTGTTCCCTGGTTTTGCTGCTGAAAGCCTTGCAGAAGTTTACTTTGCCCACGGATGTGATTTACATCTGACCACTGAGATGCTGAGTCAGTTAGAGCTTCAAGTTGATGGTAGTTTCAATCAGAATCTGAATTCAAAGACTATGTCAACTCCCAATCTCAGTGCAATGGACTTCCCTGCACTTACTTCACCGGATGGCCAGACTGCTTCAGTAAAATATGTGGTAGATAATGTCCAACAAAGTAGCAATCCTTACCGATCATCTGACAGTGATGTGCTATTTTTCAAATCTAGCTCTCCAGTTCCATCTAGAGATGTCGTTGACTTTGCTTCAGCTGTTAGGAAGTTGGCTTCTCAGGATTCTGGTGGTATTTGGAAATATGATAAAAATGGCTCTGGTGATGCTGCTATTGGCTCAAGTAGGAGTTCAAATGTTCTGGCTAGTGGCTACAATGGTGGACAGGGGAGAGCACACTTTGGTGATCGATTACAGAACCGTGGTTCAGCTCGGGCAGCTCCTATTTGGCTTGAAACCGGTGATGCAGTTGGTAAATACTATTGTTCATATGCTTCATTTTGGGATGAATTCTTTGTGCACTATTTTCTTTAA 1296 0.4198 MNLSKKVSQTDAKLLSPSKATTLNPNAAEFIPFSLRSLSGTTSSVDTTATLTAAGALGKAVLDRSESSISNNSDDEVHQYWRCRLPDDITPDFKVMGEDESRGLDDLSLAGLSIHDDNEASRFPSSKGSKFIINGQEEKSQQHINGNSFADKLRFSNSSYREDPSSASFLNAMAKPWDRAIGSADQHISCVQEGLTYDDNSSHGYLNDVLAENAIVDDTDLNPLEFLASLFPGFAAESLAEVYFAHGCDLHLTTEMLSQLELQVDGSFNQNLNSKTMSTPNLSAMDFPALTSPDGQTASVKYVVDNVQQSSNPYRSSDSDVLFFKSSSPVPSRDVVDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRSSNVLASGYNGGQGRAHFGDRLQNRGSARAAPIWLETGDAVGKYYCSYASFWDEFFVHYFL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01664 431 CDD CUE_CID7_like 221 263 IPR041806 -
Cca03g01664 431 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01664 Cca-Chr3 35754546 35759721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01664 - - gmx:100814198 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01664 03 35754546 35759721 Cca03g01664 03 35754546 35759721 ECH