Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01650 ATGAGGACAGTGCTTTCGCGCTTGATCCATTCCACGCCTTCCATTTCAAGGCTCAATGCCACGGCAATTTCAATCAGCGGGAGAAATCTCTGCACGGATTCTAACAAAGTTGATGAGCCCTTCAAAGTTGAAGAAGCAGAGACTGTTAATGTGCCCCCACCCCCAGCAGAAAAGTTGCTTGTGTTGGGAGGCAATGGATTTGTTGGATCACACGTTTGTAGAGAAGCCTTAGATCGCGGCTTGTCTGTTGCGAGTCTTAGCAGGTCTGGTAGGTCGTCACTGCACGATTCCTGGGCTACCAATGTTTCTTGGTATAAAGGGAATCTCCTTTCAAATGATTCATTGAAAGAAGCTTTGAATGGCGTCACTGCTGTTATTTCTTGCGTCGGTGGTTTTGGCTCCAACTCATACATGTACAAAATTAATGGAACTGCTAACATCAATGCAATTAGAGCAGCTTCAGATCAAGGTGTTAAAAGATTTGTCTATATCTCCGCTGCTGACTTTGGTGTAGTAAATTACTTACTACAGGGGTATTATGATGGAAAGAAAGCTGCTGAAACAGAGATCCAGGCCAAATTTCCGTATGGAGGAGTAATTCTGAGGCCAGGATTTATTTATGGGACTCGAAGTGTTGGGAGTTTGAAGATACCCCTTGGTGTAATTGGATCTCCACTGGAAATGGCTCTCGAAATTGCTAAGCCGTTGAAGCAGATCCCACTTGTTGGGCCTCTATTGACACCTCCTGTCAATGTTACTGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGATGCTGTTTTCCCCCCGGGGATCGTAGATGTTCATGGAATACAACGTTACAGTCAGCAACATAAATGA 861 0.4495 MRTVLSRLIHSTPSISRLNATAISISGRNLCTDSNKVDEPFKVEEAETVNVPPPPAEKLLVLGGNGFVGSHVCREALDRGLSVASLSRSGRSSLHDSWATNVSWYKGNLLSNDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLLQGYYDGKKAAETEIQAKFPYGGVILRPGFIYGTRSVGSLKIPLGVIGSPLEMALEIAKPLKQIPLVGPLLTPPVNVTAVAKVAVRAATDAVFPPGIVDVHGIQRYSQQHK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01650 286 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED 1 285 - -
Cca03g01650 286 Gene3D - 53 282 - -
Cca03g01650 286 Pfam NAD(P)H-binding 63 207 IPR016040 -
Cca03g01650 286 PANTHER BNAANNG24990D PROTEIN 1 285 - -
Cca03g01650 286 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 277 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01650 Cca-Chr3 35548713 35557317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01650 - - gmx:100791278 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01650 03 35548713 35557317 Cca03g01650 03 35548713 35557317 ECH