Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01646 ATGACGAGGAATGCCTTCGCGGCTCTCTACCGTCACCGCGCCGCCACTCCTAACTCCGCATGCTTACATCACGAGAGTCTCACTGAAATTATCTTACGCAAATGCGTGCCACTGGATTGCCGTTTTTGTTCTCGCTTATTGCAACGAAATTCATATTCAACTGGTTTCACGAGCGTGCATGGCGAAACGCCCTCTGCTGAGTATGCCAGGATGAGGAGGGAATCCCTGGAAAGTAAATTCGGGCATGCTCTCGGAACTTATAGCTCTAAGAGTTTCAATCCTATCTACCGATTTGGCCCCTTTTTGGCTTTGTACAGGGCATCCATTATTTCATTTCATGTATTCAGGCTAATGATATGGCAATTATTCGTTCAAGACATGAAAGAACGTGCAGTTAAGTTTCGTGAAACACTAATACGCTTGGGTCCTTTCTACATTAAGGCAATTCTTATATTTGACTTAATCCATTCATGGTTACAGCTTGGGCAGGCATTGAGCACCCGGCCTGACATATTACCAACAGTATATTGCCAAGAACTTGCCAAGTTACAGGATCAAATACCTCCATTTCCAACTGATGTTGCAATCAGATCTATTGAGAACCAGTTGGGTGTTCCTATTAGTGAAGTTTTTAATGACATCAGCCCAATGCCTATTGCAGCAGCATCCTTAGGGCAAGTGTATAAAGCTCACCTGCACTCTGGAGAGCTGGTAGCTGTGAAAGTACAGAGGCCTGGTATGTCACTTTCATTGACCCTTGATGCTTTGTTATTCCATATGATTGGGGGCCAATTGAAACGGTTTGCCAAAGCTCGCAAAGATCTTTTGGTTGCAGTAAATGAAATGGTAAGGCACATGTTTGATGAAATTGATTATGTCCTTGAGGGCAAAAATGCTGAGCGCTTTGCTTCAATCTACTGTTTGTCTGCAAGTGGGATTAAAGACAAAAGAACAAAATCCGTAAAAGCTCCAAAAATATATTGGGACTACACATGCTCCACTGTGCTGACTATGGAGTGGATAGATGGAATTAAGCTTACAGATGAAACTGGCTTGATTAAAGCTTCTTTGAACAGAAGGGAACTCATTGACCAGGGATTATACTGCTCTTTGAGGCAAATGCTTGAGGTTGGTTACTTCCATGCCGATCCTCATCCAGGAAACCTTGTTGCGATAAATGATGGATCACTAGCATATTTCGACTTTGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAATGATTGTGCATTTTGTTAATCGTGATTCTCTGAGCTTGGCAAATGACTTTCTTTCTTTGGGATTTATCCCTGAGGGTGTTGATATACATTCAGTGTCTGATGCTCTGCAAGCATCATTTGCTGATCGGACCGGTGAATCTCAAGATTTCCAGGGAATTATGAACCAGCTATATGATGTCATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTTGTGATTAGAGCATTGGGATCACTAGAAGGCACAGCTAAAGCTCTGGATCCTGATTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGAAGACTTATAGCTGACCCAAGCCCTGATATGAGAAGAATTTTGAGGGAACTTCTCATTCGTAACAATGGATCTATAAGGTGGAACCGGCTAGAACGCCTGGTAGCTGCAATATCTGAACAAGCTTCCGATATAACTGGAGACCCTCGTTCTGAAAAGTTTTCGAGTTCTTCTGTTTGGAAATTATTTGATATGGATGCTGTTGTTGATTCCACTGAAGATCTTCTGTTATTCATATTATCAGATAAGGGTATTAGAGTGCGTCTTTTCCTTCTTCGAGATATAGTAGAAGCAGCTAATGTGTTTCTGCATGATGAAGTGATTGACTGCGCATTAAATGAAGATCCTCAAGGCCAGAGGACATTACTATTTGAGGAGCGTGCTATCCTCGGTAGAATTGGAAAGGGCTTTGAATACCTTTGTGGGGTGGTGAAGTTGGCGCCATGGGAGTGGACAACTATGCTTATTCGGATGGCAGGGAAGCCCGAGTTTCATAACTTTGCTTTAGACATTATTTCAGCTTTAGCTTTGCATTCTAGCCACAAATTACAGGTAGCATTTTGGCTCTATTTGTCCAAACTTCTTCACAAATGGAGGTAG 2166 0.4229 MTRNAFAALYRHRAATPNSACLHHESLTEIILRKCVPLDCRFCSRLLQRNSYSTGFTSVHGETPSAEYARMRRESLESKFGHALGTYSSKSFNPIYRFGPFLALYRASIISFHVFRLMIWQLFVQDMKERAVKFRETLIRLGPFYIKAILIFDLIHSWLQLGQALSTRPDILPTVYCQELAKLQDQIPPFPTDVAIRSIENQLGVPISEVFNDISPMPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFASIYCLSASGIKDKRTKSVKAPKIYWDYTCSTVLTMEWIDGIKLTDETGLIKASLNRRELIDQGLYCSLRQMLEVGYFHADPHPGNLVAINDGSLAYFDFGMMGDIPRHYRIGLIQMIVHFVNRDSLSLANDFLSLGFIPEGVDIHSVSDALQASFADRTGESQDFQGIMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLIADPSPDMRRILRELLIRNNGSIRWNRLERLVAAISEQASDITGDPRSEKFSSSSVWKLFDMDAVVDSTEDLLLFILSDKGIRVRLFLLRDIVEAANVFLHDEVIDCALNEDPQGQRTLLFEERAILGRIGKGFEYLCGVVKLAPWEWTTMLIRMAGKPEFHNFALDIISALALHSSHKLQVAFWLYLSKLLHKWR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01646 721 CDD ABC1_ADCK3-like 182 435 - -
Cca03g01646 721 SUPERFAMILY Protein kinase-like (PK-like) 184 426 IPR011009 -
Cca03g01646 721 Pfam ABC1 atypical kinase-like domain 182 432 IPR004147 -
Cca03g01646 721 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 38 710 - -
Cca03g01646 721 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 38 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01646 Cca-Chr3 35478140 35491354 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01646 K08869 - gmx:100811652 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01646 03 35478140 35491354 Cca03g01646 03 35478140 35491354 ECH