Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01642 ATGAGTGGATCTGTATCTTCTACGCTGATTCCCAGTAACACTTTCTTCATATCACGCATTCCATTCCCAATTCCTGACGCAGTAACGGTTAAGGGCAAGAACAGAAGTTGTCACCTACGCGTCCACGTTTCTATGGTGGACTCCTCCTCAGCTGATTTCACCAGACGCATCGAACAAGCCTGGTtaatttctaagCAACCAAGGCCAATAGTGTGTTCATCTTGCAACTCAAAAGGGCATATTGAATGTAAATGGTGTGCGGGTACTGGCTTCTTTATTCTGGGTGATAACATGCTTTGTGAAGTCCCATCCAGAAACACTACCTGTATCATTTGCACTGGAAAGGGATCAATGTGCTGTTCTCATTGTCAAGGAACAGGCTTTCGTGCAAAGTGGTTGGGAGAACCTCCTACTAATACTTCCTAA 426 0.4413 MSGSVSSTLIPSNTFFISRIPFPIPDAVTVKGKNRSCHLRVHVSMVDSSSADFTRRIEQAWLISKQPRPIVCSSCNSKGHIECKWCAGTGFFILGDNMLCEVPSRNTTCIICTGKGSMCCSHCQGTGFRAKWLGEPPTNTS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01642 141 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 31 139 - -
Cca03g01642 141 PANTHER OS09G0423700 PROTEIN 31 139 - -
Cca03g01642 141 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 70 129 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01642 Cca-Chr3 35441505 35442635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01642 - - gmx:100810900 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01642 03 35441505 35442635 Cca03g01642 03 35441505 35442635 ECH