Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01633 ATGAGACACACTCCGAGGATTGGTGTCCACTGTTTCTTTGTGTGTTTCAATATATTGGTGTTGTTGAGCGGTGTTTGTGAATCAACATCATCCTCTCTCCACTGTAAAGCATGGTTAGTGCAATCGATTCCCACCAATATGCCCCACCTATCCCATGTTCCCGGCGTCCTCTCTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCACGAGGCTTCACATAATTGCTCAGTACTGGCAGCTGCAACCTTCTCCCAACGATCCTCGCTCTGGGGACTATGGTTACTCTCAACATCAGATGCATGAATTTGGTGCCCATCAAGGTGTTGCCCTTTATCAAGCATTAGATGCTGCTGCTGAACGTAATGTTAGCATCAGGTTACTGTCCCACTCTGGAGTGTATCCAACGTTTACCTTAGAACCATCCAAACTTGCTTCCGGAAGGCCTAATGTTGAGAATGTGACATTGCTGCTAGAGGATTGGTGGGGCTCGGGCATTGTCCATGCCAAAGTTTGGATATCTGACAGTAGGGATGTGTATCTTGGATCTGCAAACAATGACTGGAAATCTCTTACGCAGGTCAAGGAACTTGGAATTTATTTTGCTGATTGTCCTGGAATAGCTAAAAAGGTTGAGGTCTACTTTGACAATTTATGGACGCTTGCATCTCTTAATTCCTCAGCTTACACAAAAAAAGTGTTTGATCAAGAGTGGCAAGTTGAGAGAAAGGTTCCTTGCTGGTCGCATTTCGTTGATCGTAGAGAGAGGTGCAAGTCACCTCTTCCTCAATATCTGAAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCATATATGTTTGAGGTTTCATTTCAAACTCCTGGGAGTAACCTTTCAACAAAGCTCCCCCAAGTCAGCTATCTATCTTTTGCACCCTCAGAGCTATTATTTGGCAAATATCAGGCTGATGAGCAGGCATGGATTGAAACAATTAAGTCAGTTGGAAAAAAGGGGACAGTTAGAATCAGCACCATGGACTGGCTAGGTCAGTCAGAATTTATGGACCAAACAATTTACTGGTCATCCCTATCCTCTGCAATATCACAGGTGGTGTTTTCTAAGAATGCAACAGTGCAGATACTTGTGGCATATTGGGCACACTTCATCAATAACACAGATGTGTACCTGAAGTCCCTCCTCTACACCAACAATCTCTGCTCTTCCTCAAAATACAACACATGCTCTGGGAAAGTTGAGATAAAATACTATGTGGTTCCAGGTTTCAACATGACAGGACCTGCCATCAAGGGTGGAACTAGAACAGGAAATATATACCCTGGATTTACAAGAGTCAATCATGGAAAATATGCAGTTAGTGATCTAAGGGCACACATTGGGACTAGCAATCTTGTATGGGACTACTTCTATACAACAGCTGGTGTCAGCTTTGGGACATATAACACTGCCATTGTCTCTCAACTTAGGGAAATTTTTAATGCTGATTGGAACTCACCCTATGCTGTTCCATTTGAAGAGCTGGAGAAAACAAGAAGTTCAATCTAA 1554 0.4376 MRHTPRIGVHCFFVCFNILVLLSGVCESTSSSLHCKAWLVQSIPTNMPHLSHVPGVLSTGDVLRWLAANSTTRLHIIAQYWQLQPSPNDPRSGDYGYSQHQMHEFGAHQGVALYQALDAAAERNVSIRLLSHSGVYPTFTLEPSKLASGRPNVENVTLLLEDWWGSGIVHAKVWISDSRDVYLGSANNDWKSLTQVKELGIYFADCPGIAKKVEVYFDNLWTLASLNSSAYTKKVFDQEWQVERKVPCWSHFVDRRERCKSPLPQYLKTPHVAGYPILSDPYMFEVSFQTPGSNLSTKLPQVSYLSFAPSELLFGKYQADEQAWIETIKSVGKKGTVRISTMDWLGQSEFMDQTIYWSSLSSAISQVVFSKNATVQILVAYWAHFINNTDVYLKSLLYTNNLCSSSKYNTCSGKVEIKYYVVPGFNMTGPAIKGGTRTGNIYPGFTRVNHGKYAVSDLRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLREIFNADWNSPYAVPFEELEKTRSSI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01633 517 Pfam PLD-like domain 110 221 IPR025202 -
Cca03g01633 517 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 165 192 IPR001736 GO:0003824
Cca03g01633 517 SUPERFAMILY Phospholipase D/nuclease 321 512 - -
Cca03g01633 517 SMART pld_4 445 471 IPR001736 GO:0003824
Cca03g01633 517 SMART pld_4 165 192 IPR001736 GO:0003824
Cca03g01633 517 CDD PLDc_vPLD3_4_5_like_1 39 206 - -
Cca03g01633 517 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 445 471 IPR001736 GO:0003824
Cca03g01633 517 PANTHER GM01519P-RELATED 16 512 - -
Cca03g01633 517 CDD PLDc_vPLD3_4_5_like_2 304 500 - -
Cca03g01633 517 Gene3D Endonuclease Chain A 305 502 - -
Cca03g01633 517 Gene3D Endonuclease Chain A 58 225 - -
Cca03g01633 517 PANTHER PHOSPHOLIPASE D - RELATED 16 512 - -
Cca03g01633 517 SUPERFAMILY Phospholipase D/nuclease 64 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01633 K16860 - gmx:100778897 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01633 03 35373324 35377596 Cca03g01633 03 35373324 35377596 ECH