Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01625 ATGGCGTCTACGGATAAAGAATTGGAAGAGAAGCTTCTCGAAGCCGGTAACAAGCTCCTAGATCCTCCCTCGTCGCTCGAGGAACTCCTCCCACTCCTAGACCGAGTTGAGAGTTGCCTATCAAGGGTTGATCAGTCACCTCCTGACTCTATGCAAAATGCACTCTCTCCATCATTGAAAGCATTGATTGCTGCCAAACTTTTAAGGCACACAGATGATGATGTCAAAGTTGCAGTTGCCTCTTGCATTAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTCCAATTGATAGTATCTTCATTTGAAAATCTACATGATGAGGCAAGCCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTGGTAATGCTGGACCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTGAAAACAATAAGGGGACATCATCCAGAACTTGTTTTTACATCCATGGAAACAATTATGACCCTTGTTCTAGAAGAAAGTGAAGATATATCCATAGACTTGCTGTCTCCACTCCTGGCCAGCATTAAGAAAGACAATGAGGAAGTTTCTCCAATTGCCCAAAAATTGGGGGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAACCCTACTTGGTTCAAGCAGTGAAATCTTTGGGTTTATCTCTAGATGATTATAGTGCGGTACTTGCTTCAATATGCCAAGATATGTCTGATGACTTGGAGAAAAATGATACATGTGTTACTAGTGAGCATGTGGAAGATAAGAGTGAGTCAGCAAAACAATCTCTTGAAGAGTCAACACATGTCGATAAAAAGGATTCAAGGGAGGTTACATCTTCTCAACAAGATAATCCTGATGCGAATACATCTCCAAAGTCGGTCATGAGCAATGGTGTTGCATGTGTTGGAGAAGATAATGCTTTAGCTGATTCCAAGTCCATCAAAAAGAAAGAGGAAGGTCATGAGGTGCTTAATGATGTGAATACTGTAAAAGTTGACAATAGTCAGCAAAAGCCAGAACAGGCTTCCAAGAGACGACGAAAGAAAACAAGCTCTTCGACAAAATTGGCAAAACCTTCCAAGGTTCAAGTTGCTGCTAAGGAGAAAGAAGCTGAGAAAATGGTCGACTATGAAAGCAACAGTAAGAAAGTTCCCAGTTCCCCTCCTGAGGACCATTCTGTTGAAGCAGCAGGACCTTCACAGAATGACAAAGAAATTGATGATAAGATTTCATCACCAAAGGCATGCAATGATGAATCTGAAATTGTTCCTTCTCCACCAAGGGAGAGCCTGTATGAAGAAAATAATTTGAAGAGAGTTGGACGGGCAAAAAAGAAAGATGGCCCTGTAAAAGAAGAGACTGCCGAGGATGTTTCAAAGGTGTCGGGAGGAGTTGGTGATTCTGAAGCCAAACCTGCCCGGAGGTCAGCGAAAAAGGCCCTTGTTCAAAACTCTGATGTGAAAAAAAATAGTGTGGTAGATTCAGTAAAAAAAGGAAGCGGTGCTACAAATGATGCAGATGCTAAAAAACATTCAGCCAAGAAATTAGATGAAAACAAAAAGGGCAGTTGCGGATCCTCTTCAAGACAGGTAGATAACAAGAAAAAGGGAGCGCGGGGGAAAGCTAATTCTGAAACAGATGTAGCAAAATCATCTGCTATAGATGTAGACAAGGAAATGGTTTCTTCTCCAAGATCTGGTACAAAATCAACTAAAGATGAAAATTCAGAGGAGATTCCCAAGACAAATGTGAAAAGGAAACGCACTTCTGGAAAAGATAATGGGTCTGATATGAAGGAATATGGTGAAAACCTTGTTGGTTTGCGGGTCAAAGTTTGGTGGCCTAAGGATCGGGAGTTTTACAAAGGTGCTATTCATTCTTTTGATTCTGCCAAAAAAAAGCACAAGGTCTTGTATGATGATGGTGATCAAGAAATATTAAATCTTATGAAAGAAAAATGGAAAGTCATTGAAGCTGACTCAGATGCCGATGGGGAAGAAGAAAGTGATCGAGCAAGCCTTGATGCTTCCACTGACATGGCACCAAAGAAGAAAGGGAAAACTAGTGCTGGAGAATCAACCAAGCAAGGAAAAATGGATGGTCCTTCCAGAAGCAGTGGAGCAGCAGCAGCATCCAGTAGATCAAAGGGTGTATCCATGAAGTCTAACCAGAAGTCCAAAGATGGCAACAAATCCAAAGATTCCAAGACCAATACCAAATCAGAGGAAGAAGTTAGTAGAAAATCTAAGGACAGCACTCCTAAAAGTGGTAGCAGTAAATCTATTGTTGCTGCTAAAAAAATGAGTAATAAGTCCAAGAACATTGATACTTCCAAGTCAGACGAATCAAAGGATGATGACACTAGCACGCCAAAACCCTCTGCGAAGTCTAAGCAAGAAACTGCTAAAAGTGGAAAATCCAAGCTAGAAACCCCAAAGACTGCCATTTCCAAAGGAAAACCTCCCAAAAGTGGTGGAAAGACTGATGTTAATGGTACTGGCAAGGTGAAATCTGGTTTAATGAAGAGAAAAGATCCCGAGAATGATAACTCCGATGTTTCAGCAGATGTAGAAGAGGTCAAGGGCAAGACTTCAGGTTCATCAAAGGCAAAAGGAAGTGAGGCCAAGAGTGGAAAGAAGCGTCGGAGAAGCTAG 2712 0.4145 MASTDKELEEKLLEAGNKLLDPPSSLEELLPLLDRVESCLSRVDQSPPDSMQNALSPSLKALIAAKLLRHTDDDVKVAVASCISEITRITAPEAPYDDDQMKEVFQLIVSSFENLHDEASRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFLKTIRGHHPELVFTSMETIMTLVLEESEDISIDLLSPLLASIKKDNEEVSPIAQKLGERVLESCATKLKPYLVQAVKSLGLSLDDYSAVLASICQDMSDDLEKNDTCVTSEHVEDKSESAKQSLEESTHVDKKDSREVTSSQQDNPDANTSPKSVMSNGVACVGEDNALADSKSIKKKEEGHEVLNDVNTVKVDNSQQKPEQASKRRRKKTSSSTKLAKPSKVQVAAKEKEAEKMVDYESNSKKVPSSPPEDHSVEAAGPSQNDKEIDDKISSPKACNDESEIVPSPPRESLYEENNLKRVGRAKKKDGPVKEETAEDVSKVSGGVGDSEAKPARRSAKKALVQNSDVKKNSVVDSVKKGSGATNDADAKKHSAKKLDENKKGSCGSSSRQVDNKKKGARGKANSETDVAKSSAIDVDKEMVSSPRSGTKSTKDENSEEIPKTNVKRKRTSGKDNGSDMKEYGENLVGLRVKVWWPKDREFYKGAIHSFDSAKKKHKVLYDDGDQEILNLMKEKWKVIEADSDADGEEESDRASLDASTDMAPKKKGKTSAGESTKQGKMDGPSRSSGAAAASSRSKGVSMKSNQKSKDGNKSKDSKTNTKSEEEVSRKSKDSTPKSGSSKSIVAAKKMSNKSKNIDTSKSDESKDDDTSTPKPSAKSKQETAKSGKSKLETPKTAISKGKPPKSGGKTDVNGTGKVKSGLMKRKDPENDNSDVSADVEEVKGKTSGSSKAKGSEAKSGKKRRRS 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01625 903 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 2 871 IPR039776 GO:0007064
Cca03g01625 903 MobiDBLite consensus disorder prediction 711 744 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 791 826 - -
Cca03g01625 903 Pfam Sister chromatid cohesion protein PDS5 protein 28 232 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 857 884 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 522 541 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 416 434 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 589 618 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 331 345 - -
Cca03g01625 903 SUPERFAMILY Tudor/PWWP/MBT 623 663 - -
Cca03g01625 903 PANTHER TRANSCRIPTIONAL REGULATOR 2 871 - -
Cca03g01625 903 SUPERFAMILY ARM repeat 38 249 IPR016024 -
Cca03g01625 903 MobiDBLite consensus disorder prediction 331 620 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 263 316 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 774 790 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 689 710 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 299 315 - -
Cca03g01625 903 Gene3D - 616 668 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 451 477 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 678 903 - -
Cca03g01625 903 CDD TUDOR 626 668 IPR002999 -
Cca03g01625 903 MobiDBLite consensus disorder prediction 381 398 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 263 298 - -
Cca03g01625 903 MobiDBLite consensus disorder prediction 745 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01625 Cca-Chr3 35230982 35239279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01625 - - gmx:100809147 1281.54