Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca03g01624 | ATGGCTCTCGGATTCTTCGCcctcgctctcttcctcttcctcactctcgacaccgacatcgctccctcttccaccgcctccgcctccgccgcgtcctccGAAGGCGTCGAGGTGCATGTCACTTACGGCACGGTTCTGAAGCTCATGCACGAGAAGACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCCGGTAGTGGACAGCAATCGGTTACGGGTTTCCCCAATGTCGACGATGCCAATAGTTACTGGATTGTTAGACCTGAGCCAGGAACTTCTGCCAAACAAGGTGATGCCATTAAAAGTGGCACAATCATTAGATTGCAGCACATGAGGACGAGGAAGTGGCTGCACAGCCACTTGCATGCATCCCCAATATCAGGCAATCTTGAGGTGAGTTGTTTTGGAGGAGAATCTGAGTCTGACACTGGGGACTATTGGAGGCTTTTAATAGAAGGAAGTGGGAAGACTTGGAAGCAGGATCAGAAGATTCGCCTTCAGCATGTAGACACTGGAGGCTATCTACATAGTCATGATAAGAAATACAGTCGGATTGCTGGGGGGCAGCAAGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCTGCAGAAGGTGTGTACCTTCCGGTTACAGAAAGCAAATGA | 663 | 0.4314 | MALGFFALALFLFLTLDTDIAPSSTASASAASSEGVEVHVTYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDANSYWIVRPEPGTSAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLLIEGSGKTWKQDQKIRLQHVDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK | 220 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca03g01624 | 220 | ProSiteProfiles | MIR domain profile. | 37 | 91 | IPR016093 | - | |
| Cca03g01624 | 220 | SMART | mir_2 | 37 | 91 | IPR016093 | - | |
| Cca03g01624 | 220 | SMART | mir_2 | 99 | 154 | IPR016093 | - | |
| Cca03g01624 | 220 | SMART | mir_2 | 157 | 211 | IPR016093 | - | |
| Cca03g01624 | 220 | ProSiteProfiles | MIR domain profile. | 99 | 154 | IPR016093 | - | |
| Cca03g01624 | 220 | Gene3D | - | 23 | 220 | - | - | |
| Cca03g01624 | 220 | PANTHER | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN | 1 | 220 | - | - | |
| Cca03g01624 | 220 | ProSiteProfiles | MIR domain profile. | 157 | 211 | IPR016093 | - | |
| Cca03g01624 | 220 | PANTHER | MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED | 1 | 220 | - | - | |
| Cca03g01624 | 220 | SUPERFAMILY | MIR domain | 38 | 211 | IPR036300 | - | |
| Cca03g01624 | 220 | Pfam | MIR domain | 71 | 204 | IPR016093 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca03g01624 | - | - | gsj:114414928 | 398.667 |