Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01607 ATGGCAACTCCTAAGCCAGAGGAGATAAGCCACCCACCAATGGACCAACTTCAAGGCTTAGAGTATTGTATAGACTCAAACCCTTCTTGGGTGGAAACAATAGTTCTTGGTTTCCAGCATTACATTCTGGCCTTAGGAACTGCAGTCATGATTCCTTCATTTCTGGTGCCTTTGATGGGTGGAAGTGATGATGATAAAGTGAGGGTGCTACAGACTCTGCTTTTTGTTGAAGGAATTAATACACTTCTGCAGACACTCTTTGGAACCCGGTTGCCAACAGTGATAGGAGGGTCTTATGCGTTTATGGTCCCCATTATATCGATAATTCATGATCCCTCTTTGACAAGGATTGAGGACCCACATTTGAGATTTCTTAACACCATCAGAGCCGTACAAGGGGCAATGATAGTAGCATCAAGCATACAAATTATTTTGGGCTTTAGTCAGTTATGGGCCATATGTTCTAGGTTTTTCAGTCCACTTGGAATGGTTCCAGTAATTGCATTAGTTGGTTTTGGGTTATTTGACCGAGGGTTCCCTGTGGTTGGACATTGCGTTGAAATTGGAATTCCAATGCTAATTCTGTTTATAGCCTTCTCTCAGTACTTGAAAAATTTTCATACAAGACAACTACCAATACTAGAGCGATTTGCTCTACTAATATCAACCACAGTGATATGGGCATATGCACATCTCTTAACAGCAAGTGGAGCATACAAACACCGTCCTGACTTAACCCAACATAATTGCAGAACAGACAGGGCTAACCTCATTTCTTCTGCTCCATGGTTAAAGATCCCATACCCTCTTGAGTGGGGTGCTCCAACATTTGATGCTGGTCATGCTTTTGGAATGATGGCTGCTGTTTTAGTCTCCTTAATTGAGTCTACTGGGGCATACAAAGCTGCATCAAGACTAGCAAGTGCAACACCACCACCAGCTCATGTTCTGAGCCGTGGTATTGGTTGGCAAGGAATTGGAATCTTGCTGAATGGCCTTTTTGGAACACTCACTGGTTCAACAGTTTCTGTAGAGAACGTGGGGCTTCTAGGAAGCACTCGTGTTGGAAGTCGAAGGGTTATTCAAATTTCAGCTGGCTTTATGATATTCTTCTCAATGTTAGGTAAATTTGGAGCCTTATTTGCATCAATACCCTTCCCCATTTTTGCAGCTGTATACTGTGTTCTGTTTGGGCTTGTGGCTTCTGTGGGGCTATCATTCTTGCAGTTCACTAACATGAACTCAATGAGGAACCTCTTTATTACTGGTGTTGCCCTTTTCTTGGGTTTTTCTGTTCCTGAGTATTTCAGAGAGTACACTGCCAAGGCCCTTCATGGTCCTACTCATACAAGGGCTGGATGGTTCGATGATTTCCTTAATACTATCTTCTTCTCATCACCAAGTGTTGCATTGATTGTTGCTGTGTTCTTGGACAATACTCTTGATTACAAGGATAGTGCGAAAGATAGGGGAATGCCATGGTGGGCAAAGTTTAGAACATTTAATGGAGATAGCCGGAATGAAGAGTTCTATACCCTCCCTTTCAACCTCAACCGCTTTTTCCCTCCACGCTAG 1575 0.4298 MATPKPEEISHPPMDQLQGLEYCIDSNPSWVETIVLGFQHYILALGTAVMIPSFLVPLMGGSDDDKVRVLQTLLFVEGINTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDPSLTRIEDPHLRFLNTIRAVQGAMIVASSIQIILGFSQLWAICSRFFSPLGMVPVIALVGFGLFDRGFPVVGHCVEIGIPMLILFIAFSQYLKNFHTRQLPILERFALLISTTVIWAYAHLLTASGAYKHRPDLTQHNCRTDRANLISSAPWLKIPYPLEWGAPTFDAGHAFGMMAAVLVSLIESTGAYKAASRLASATPPPAHVLSRGIGWQGIGILLNGLFGTLTGSTVSVENVGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFPIFAAVYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGFSVPEYFREYTAKALHGPTHTRAGWFDDFLNTIFFSSPSVALIVAVFLDNTLDYKDSAKDRGMPWWAKFRTFNGDSRNEEFYTLPFNLNRFFPPR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01607 524 Pfam Permease family 32 436 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca03g01607 524 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 523 - -
Cca03g01607 524 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 2 1 523 IPR029948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01607 Cca-Chr3 34938191 34942366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01607 5 523 Organic Solute Cotransporters AT2G34190 85.549 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01607 - - gmx:100795365 1041.18