Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01601 ATGTACAGAGTAGCGAACGCGTCGGAATACCTGGTGATCACCGGCGTGGGAATAGCGGATATAAAGCTTGCGAAGAAAGCATGGGTTCTACCGGGGCAGTCATGCACGGTCTTCGACCTCTCTCCGGTGAACTACACCTTCGAAGTTCAGGCGATGAGCGCGGAGAAGCTTCCCTTCATCCTGCCGGCGGTGTTCACCATCGGTCCCAGGGTGGACGACAACTCCAGCCTCCTGAAATACGCGAAGCTGCTCTCCTCCCACGACAAGCTCTCCCACCACGTGAAGGAGCTGGTGCAGGGCATCATCGAGGGCGAGACACGTGTCCTGGCTGCCTCCATGACCATGGAAGAGATCTTCAGGGGCACCAAATCCTTCAAGCAAGAGGTGTTCGAGAAGGTTCAGCTTGAGCTCAACCAGTTCGGCCTTTTGATCTACAACGCCAACGTGAAGCAGCTGGTGGACGTCCCCGGTCACGAGTATTTCTCCTACCTCGGCCAGAAGACTCAGATGGAGGCTGCCAACCAGGCCAAGGTTGACGTGGCGGAGGCCAAGATGAAGGGAGAGGTTGGAGCCAAGATGCGAGAGGGCCAGACGCTGCAGAATGCGGCCAAGATCGACGCCGAGACCAATATCATATCCACGCAGAGGCATGGAGCGGGGAAGAAGGAGGAGATAAAGGTGAGGACGGAGGTGAAGGTGTTTGAGAACGAGAGGGAGGCTGAGGTGGCTGAGGCTAACTCTGAGCTTGCCAAGAAGAAAGCTGTGTGGGCTCAGGCGGCGCAGGTGGCGGAGGTGGAGGCTGCAAAGGCTGTGGCGCTCAGAGAAGCCGAGTTGCAGAGGGAGGTTGAGAGGATGAATGCTCTCACCACCACCGAGAAGCTTAAAGCCGAGTTCCTCAGCAAAGCCAGTGTCGACTATGAAACCAAGGTGCAAGAGGCAAACTGGGAGCTCTACAAGAAGCAAAAAGGTGCAGAAGCCATATTGTTTGAGAAGGAGAAAGAGGCAGAAGCACAAAAGGCACTCGCAGAGGCAGCATTTTTCAGTCGGCAACAAGCAGCAGAAGCAGAGTTATTTGCAAAGAAAAAAGAGGCAGAGGGGCTTGTGGCACTTGGGCATGCCCAAGGGGCATATTTAAGCACACTTCTTGCTGCACTTGGAGGCAACTACGCCAATCTGAGAGACTATTTGATGATAAATAATGGCATGTTTCAACAGATTGCCAAGACCAATGCTGATGCCATACGTGGACTTCAGCCAAAGATTAGTATTTGGACGAATGATGGGAATGCGAATGGCATGAAGGATGTTGCTGCTGTGTACAAAATGTTGCCACCTCTGTTTCAGACAGTCCATGATCAAACGGGCATGCTGCCACCCACTTGGATGGGAACCCTACCCGACAACTCTTCTAATTAA 1416 0.5353 MYRVANASEYLVITGVGIADIKLAKKAWVLPGQSCTVFDLSPVNYTFEVQAMSAEKLPFILPAVFTIGPRVDDNSSLLKYAKLLSSHDKLSHHVKELVQGIIEGETRVLAASMTMEEIFRGTKSFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEAKMKGEVGAKMREGQTLQNAAKIDAETNIISTQRHGAGKKEEIKVRTEVKVFENEREAEVAEANSELAKKKAVWAQAAQVAEVEAAKAVALREAELQREVERMNALTTTEKLKAEFLSKASVDYETKVQEANWELYKKQKGAEAILFEKEKEAEAQKALAEAAFFSRQQAAEAELFAKKKEAEGLVALGHAQGAYLSTLLAALGGNYANLRDYLMINNGMFQQIAKTNADAIRGLQPKISIWTNDGNANGMKDVAAVYKMLPPLFQTVHDQTGMLPPTWMGTLPDNSSN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01601 471 PANTHER FLOTILLIN-RELATED 1 465 IPR027705 -
Cca03g01601 471 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Cca03g01601 471 PANTHER FLOTILLIN-LIKE PROTEIN 6 ISOFORM X1 1 465 - -
Cca03g01601 471 Gene3D Band 7 domain 38 155 IPR036013 -
Cca03g01601 471 Pfam SPFH domain / Band 7 family 9 184 IPR001107 -
Cca03g01601 471 CDD SPFH_flotillin 28 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01601 K07192 - gmx:547522 763.837