Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01575 ATGGCTCCGACGACGATCCGGAAGGCGATTGGAGTGGTGAAGGACCAGACGAGCATAGGGATAGCCAAGGTGGCCAGCAACATGGCGCCGGAGATGGAGGTGGCCATCGTGAAGGCCACCAGCCACGACGACGACCCCGCCAGCGACAAGTACGTGAGGGAGATCTTGAATCTCATGTCTCACTCGCGCGGCTACGTCCACGCCTGCGTCACCGCGGTCTCCAAGCGTCTCGGCAAGACGCGCGACTGGATCGTGGCGCTCAAGGCGCTCATGCTCGAGGAGATCCTCTACGCCACCCGCAGGGGAACCAGGCTCCTCAATATGTCGGATTTCAGAGACGAGGCTCACTCCAGCTCCTGGGATCACTCCGCTTTTGTTAGGACTTATGCTATGTATCTCGATCAGAGGCTTGAGATGATGCTCtttgatagaaaaagtgctgctgctggaactgctgctgctggtgctgctgctggtggtagtgttggtggtgctagcggtggtgatgacaggtttggtggAGGGGATGATAGGTTTGGGGGAAGGGACAATTTCCGGTCGCCGCCGTACGAGTATGGGGGTGGAGAGTTTAGAGATGGATATGGGAATGGGATGAGGAGGACTAGGTCGTATGGGGACATGAGTGAATCGGTGGGGAGAGGGGAGGAGAAGAGGGTTGTGAGTGTGACTCCGTTGAGGGAAATGACGCCGGAGAGGATTTTCGGCAAGATGGGTCATTTGCAGAGGTTGTTGGATCGGTTTTTGGCTTGTAGGCCAACTGGGTTGGCTAAGAATAGTAGGATGGTTTTGATTGCGTTGTATCCTGTGGTCAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAGTTCTTTGATATGGAGTATCCTGATTGTGTGAAGGCCTTTGATGCTTATGCTAGTGCTGCTAAGCAGATTGATGAGCTGGTAGCTTTTTACAATTGGTGTAAGGATACCGGTGTGGCGAGGTCCTCAGAGTATCCTGAGGTTCAGAGGATTACCAGTAAGTTGCTCGAGACTTTGGAGGAGTTTGTGAGGGATAGGGCCAAGAGGCCGAAGAGTCCAGAGAGGCAAGAGGAGGCTCCACCGGTGGAGAAGGTGGAGGAGGAGCCAGTGCCAGATATGAATGAGATCAAGGCACTGCCTCCGCCAGAGAATTATACCCCGCCTCCTCCACCTGAACCTGAGCCTAAGCCGCAACCACAGGTTACAGAGGACTTGGTGAATCTGAGAGATGATGCAGTCAGTGCGGATGACCAGGGGAATAGATTGGCTTTGGCACTCTTTGCTGGTGCACCTGGTAATAATACAAATGGATCGTGGGAAGCCTTCCCGTCAAATGGACAGCCAGAAGTGACTTCAGCCTGGCAAACCCCGGCTGCGGAGCCTGGGAAAGCTGATTGGGAATTGGCATTGGTAGAAACTGCGAGCAACTTGTCAAAGCAGAAGGCAGCTTTAGGTGGTGGGTTTGATCCGCTATTGTTGACTGGTATGTATGATCAAGGAATGGTGAGGCAACATGTCAGCACTACCCAACTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCGGGACCAGGGAAGACTACAACCCCTGTTTTGGCTCTCCCTGCCCCAGATGGATCTGTGCAGCCGGTTAATCAGGACCCGTTTGCTGCATCATTGAGCATTCCACCACCATCCTATGTGCAAATGGCAGATATGGAGAAGAAGCAGCATTTGCTTGTGCAGGAGCAGCAGGTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAATCTAGCTTGGCCAGACTGAATGGCACTGGATACTATGCTGGAGGTCCTATGCCCACGATGCCTTATGGAATGCCCCCGGTCAATGGAATGGGACCTCCAACAGGTACTACGGGGATGCTATGGAGACTGAGTTGA 1956 0.5072 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPEMEVAIVKATSHDDDPASDKYVREILNLMSHSRGYVHACVTAVSKRLGKTRDWIVALKALMLEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLEMMLFDRKSAAAGTAAAGAAAGGSVGGASGGDDRFGGGDDRFGGRDNFRSPPYEYGGGEFRDGYGNGMRRTRSYGDMSESVGRGEEKRVVSVTPLREMTPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERQEEAPPVEKVEEEPVPDMNEIKALPPPENYTPPPPPEPEPKPQPQVTEDLVNLRDDAVSADDQGNRLALALFAGAPGNNTNGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKAALGGGFDPLLLTGMYDQGMVRQHVSTTQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQVWHQYARDGMQGQSSLARLNGTGYYAGGPMPTMPYGMPPVNGMGPPTGTTGMLWRLS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01575 651 MobiDBLite consensus disorder prediction 361 389 - -
Cca03g01575 651 Gene3D - 2 143 IPR008942 -
Cca03g01575 651 CDD ANTH_N_AP180_plant 33 138 - -
Cca03g01575 651 SUPERFAMILY GAT-like domain 231 361 - -
Cca03g01575 651 Gene3D ANTH domain 224 373 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Cca03g01575 651 PANTHER - 5 624 - -
Cca03g01575 651 ProSiteProfiles ENTH domain profile. 24 147 IPR013809 -
Cca03g01575 651 SUPERFAMILY ENTH/VHS domain 30 138 IPR008942 -
Cca03g01575 651 MobiDBLite consensus disorder prediction 157 185 - -
Cca03g01575 651 Pfam ANTH domain 209 361 IPR011417 GO:0005543
Cca03g01575 651 Pfam ANTH domain 32 140 IPR011417 GO:0005543
Cca03g01575 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 624 IPR045192 GO:0048268|GO:0072583
Cca03g01575 651 SMART enth_2 30 147 IPR013809 -
Cca03g01575 651 MobiDBLite consensus disorder prediction 361 417 - -
Cca03g01575 651 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01575 Cca-Chr3 34511935 34514950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01575 - - gmx:100803282 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01575 03 34511935 34514950 Cca03g01575 03 34511935 34514950 ECH