Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01553 ATGCACTTCACGGATCTTATAAGAACTTTTCACTTACAACATCATTCTAAAAAATTACCAGATAAGAATCCAGGTGAAGTGGTGACACATCTTCCTAGTACTACTGAATTGTCAGAAGCAGGAGTCAGGTTTAATGTAAACATCAATAAATTCTTTCCAGACTTTGAATTTTCAAGAGGGGTTCTTACAATTCCGCAGTTGATAGTGCAAGATAGTACTGAAATTTTGTTTCGTAATATGGTGGTTTTAGAGCAGTGTCACTATCCTCTCCAGTCCTACATTGCAAACTATGTTATTGTCATGGATTTCCTTGTAAACAAGAGCAGTGATGTGGATATACTGGTTCAAGAGAGAGTACTGCATAACTTGCTAGGGGACAGCGATTCTGTGGCTAAACTGTTTAATGGTCTTGGCAAAAATATTGTGCTATCAAATATGAGTTCCCATTATGGGCATCTCGCCCAAAAATTGAATGCTTTTCAAGGAAATCCTTGGAATAAATTGAAGTCCACTCTAAGACGTGATTATTGTAAAACTCCTTGGCAATCTGCAGTTTCCATTGCTGGAATTCTTCTCCTTGTTCTCTCTTTGCTTCAAACAGTTTGTTCTGTCGTGCAAGTTATACAACAATAG 633 0.3744 MHFTDLIRTFHLQHHSKKLPDKNPGEVVTHLPSTTELSEAGVRFNVNINKFFPDFEFSRGVLTIPQLIVQDSTEILFRNMVVLEQCHYPLQSYIANYVIVMDFLVNKSSDVDILVQERVLHNLLGDSDSVAKLFNGLGKNIVLSNMSSHYGHLAQKLNAFQGNPWNKLKSTLRRDYCKTPWQSAVSIAGILLLVLSLLQTVCSVVQVIQQ 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01553 210 Pfam Plant protein of unknown function 2 195 IPR004158 -
Cca03g01553 210 PANTHER UPF0481 PLANT-LIKE PROTEIN 1 210 - -
Cca03g01553 210 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 1 210 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01553 Cca-Chr3 34243025 34243657 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01553 - - gmx:100785283 244.202