Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01525 ATGTTCTTATGGGTTTATTTGGCTTTGTTATTTTATTTTCTTCTTATTGTTTTTTGTCCAAAGAATCACCGGAAGATGAATGTTGTGAAGCAATTAAATATTATACAAAAGAGAATCAATAAGGAGGATGCTGATTCTGCTGTACAGAAGTTGGTTTCTTTAATGACATCTTTGAAGGATCTTCAGAAGCAGGAAAATTACTTTCATTCCAATCGTGATTCTAAACAATCAGAACTTCAAGCTGAAATTAGTGAATTAGAGAGGAAAATAACAAATGACAGTGATAATGAGAACCTCTCTGACGGACTACATTGTTCTTTTACTGAATTAATTGAAAAAGTCAATTTGATGAAAAAGCAACTTGCTGCTAGACTGAGGGATATTGTAGCAGTAAGACGACAGATTGATGACCTACCATGTCAATCAGAAGTCATCCAGTACGAACGCCGGCTATCAGAACTGTATGCGCAAATCCAGGGGAAACATCGACAAACTCGTAAATACTATGCTACCTACAATGCTTTCTTGGAAATAAAAGAATTGATGTTAAAGGAAACATCTTTATTGAATTCGATCATTTCCCAGTTTCAAGAGGCCTTTAGTAGCACTGATGGACGTACAAAACTTGTTCATTCTATGGAAGGAATTGTCAAGGGAAGTCAACAGAAATTAGAAAGGGTTCATGTAGGGCTTCAAGAAGAAGAGAGAATTCGTAATGATCTGAAGCAGAGGTATGCTGCAGCAATCGGTGAGCAGAAGCGCTGCTATGCTCTGTTGAAAGCTTTTCAGGCCCAGTGTGCGAAGAATGAGAGGTTTGGGTGTCCAAGTTCCGAGTGA 837 0.3775 MFLWVYLALLFYFLLIVFCPKNHRKMNVVKQLNIIQKRINKEDADSAVQKLVSLMTSLKDLQKQENYFHSNRDSKQSELQAEISELERKITNDSDNENLSDGLHCSFTELIEKVNLMKKQLAARLRDIVAVRRQIDDLPCQSEVIQYERRLSELYAQIQGKHRQTRKYYATYNAFLEIKELMLKETSLLNSIISQFQEAFSSTDGRTKLVHSMEGIVKGSQQKLERVHVGLQEEERIRNDLKQRYAAAIGEQKRCYALLKAFQAQCAKNERFGCPSSE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01525 278 Coils Coil 76 96 - -
Cca03g01525 278 PANTHER FIDIPIDINE 22 272 IPR039116 -
Cca03g01525 278 Coils Coil 231 251 - -
Cca03g01525 278 Coils Coil 44 64 - -
Cca03g01525 278 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 93 22 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01525 Cca-Chr3 33886777 33893837 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01525 - - gmx:100806690 424.861