Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01522 ATGGAGCAAAAAACATCTGTTGTGGCTTCTATACTCAATGCAACTACTTTGGTCGTGGTTGTTGCATTAGCTCTTATCCAAGGAGTGCAAGGGATTGGAATTGGAATTGGTGTTAATTATGGCACAGTGGCAAACAACCTTCCTCCACCTGCTGAGGTTGCAAAATTTCTATCAAAATCCACCACAATCAATAGGGTGAGACTCTTTGATGCCAACCCAGAAATTCTACATGCCTTTGCTGACACTGGAATAGAGGTAACCATAACAGTCGCCAACGACCAAATCCCACACATCACTAACATAACCTATGCTCAACAATGGGTCAAAACCAATGTTCAACCTTTCATCCCAAAGACCAAACTAATCAGAATCCTTGTGGGCAACGAAGTGTTATCCACTGCCAACAAGCTTCTAATAAGCAACCTTGTCCCTGCCATGCAAACCCTTCACACAGCCCTCATGGAAGCATCATTAGACAATAGCATTAAAGTGTCCACACCACACTCTTTAGGCATTTTGTCAAACTCAAGTCCACCCTCTAGTGCCAAGTTTAGGCAAGGTTATGACACACATGTGCTTAAACCAATGCTTAATTTTCTTAGAGATTCCAATGCACCCTTTATGGTTAATCCATACCCTTTTTTTGGATGCTCTTCCAGCACACTTGATTATGCAATTTTCAGAACCAATTCTGGGGTCCTTGATGATGACACTAAGCTCCAATACACAAACATGTTGGATGCACAACTTGATGCTGTTTATTCAGCAATCAAGGTTTTGGGCTTTGAGGATGTGGAGATTGTTATTGCTGAAACGGGCTGGCCTTCTGTGGGTGATCCGGCCCAATTCGGTGTTGACCCCAAGACTGCTTCTGAGTATAATGGAAATCTCATACGCCATGTCACTTCTGGGGTTGGAACACCTCTCATGCCAAACAGAACATTTGATACTTACATTTTTGCTTTGTTTAATGAAAATTTAAAGCCTGGTCCAATATGTGAGAGGAACTTTGGGCTCTTCTGGCCCAATATGACTCCTGTTTATGACATCCCAATAATGAAGAACACTGTGGCTGTTGTTGCTAACAGTCATTGTCGAGACTTTTCAAGTTTTGAACTGTGTCTCGATCCCGCTCTCTCACCACGCTCCTCTCTTTTGCTTATATCAACACACTCTGCTCTTTCGATCTCTCACACTTCGCTTTTTCCGAAGGTGTGA 1218 0.4278 MEQKTSVVASILNATTLVVVVALALIQGVQGIGIGIGVNYGTVANNLPPPAEVAKFLSKSTTINRVRLFDANPEILHAFADTGIEVTITVANDQIPHITNITYAQQWVKTNVQPFIPKTKLIRILVGNEVLSTANKLLISNLVPAMQTLHTALMEASLDNSIKVSTPHSLGILSNSSPPSSAKFRQGYDTHVLKPMLNFLRDSNAPFMVNPYPFFGCSSSTLDYAIFRTNSGVLDDDTKLQYTNMLDAQLDAVYSAIKVLGFEDVEIVIAETGWPSVGDPAQFGVDPKTASEYNGNLIRHVTSGVGTPLMPNRTFDTYIFALFNENLKPGPICERNFGLFWPNMTPVYDIPIMKNTVAVVANSHCRDFSSFELCLDPALSPRSSLLLISTHSALSISHTSLFPKV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01522 405 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 358 IPR044965 GO:0004553|GO:0005975
Cca03g01522 405 Pfam Glycosyl hydrolases family 17 36 350 IPR000490 GO:0004553|GO:0005975
Cca03g01522 405 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Cca03g01522 405 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 22 358 - -
Cca03g01522 405 SUPERFAMILY (Trans)glycosidases 36 350 IPR017853 -
Cca03g01522 405 Gene3D Glycosidases 35 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01522 Cca-Chr3 33841523 33850850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01522 36 354 Miscellaneous Gene Families AT3G46570 57.143 5.95e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01522 - - ccaj:109788601 702.59