Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01509 ATGCCGAGAATGGAGGACATTCTGAACCTTCCAGTGCAAGACCCTGTTTGTCCCGAGTTTTCTGCTGCTCACATAAATTGGGTTAAATTGGAAGGTGGTCGCCAAGGTGGTGATGATATTGCCCTCATTCCTTTTGCCAGAGTTGATGATTTTGTGAAAGGTGAATCATCCAACCCCGAATGTCCTGCGAGTTTCCGGGTAGAATCGAGAAGGAAGAGACCTGTAGGCAGCATTGCCAAACCAAGGGTTGATGGTTATCTCGAATACACACTATACTGGTGTTCTTATGGTCCTGAAGACTACCGAGAGAGTGACTCGGGTGTAGGGGATGGCACGAGCACCAAACCTGCTTCAGGGAAGGGGAGTAGGCCAGGTCGGCGTCATATGATGAGAGGGTGCCTTTGCCATTTCACTGTTAAGAGACTGTACACCCGGCCCCTCATTGCGCTAATCATATATAACCAAAGAAAGCACGTGGATAAATCAGGGGCGCCATGTCATGGGTTACTTGACAGGGATGCAGTAGGGACAAGAGCTATGTATGCTCCACGAATTTCGGATGAGTTACGCCAGAAAGTGATGTATATGCTTTATGTTGGAATATCTTTGGACAAGATAATACAACACCATGCAGAGGGGATGCAGAAGCAAGGTGGGCCCCAAAACCGTGATGATTTCCTCACTCGAAATGATGTGCGTAACATGGAAAGGACTATTCGAAATTCTTCTCATGAGCTACATGAAAATGATGAATACAGTGTAAAGATATGGATTCAGCGCCATCAGAAGCATGTTTTTTATTTCCAAGATAACTCAGGTTCAGAACCATTTGTCTTGGGTATACAGACAGATTGGCAGCTGCAACAAATGCTTCGTTATGGAAATAATAGTTTCCTTTCTTTTCATTCGAGTTTTGGCTTGAAGAAGATTAAGTATCCCGTATGTTCTTTACTTGTTTTCAATGCATCTCAAAATGCAATTCCGGTTGCTTGGATCATCACTTCATCTTTTGTTGGTAAAGCTATTCATAAATGGATTCTATTGCTATCTGAAAAATTGCGAACCAAGGATCCCAGATGGAGGCCCAATGCTATTGTGGTTGATGATCCATCTTTGGACTATTCTATCATAAGAGAGGCTTTCCAGTGTCGCATCCTATTATGTTCCTGGCATGTTCGCCGTTCTTGGATTAAAAAACTTTTCAAAAAATGCTGCAACATTGAGGTGCAAAGGGAGATGTTTAGGCACTTGGGATGGATTCTGTACTGTACAAGAGGTTGGCCGAATGCCATGGATGCAGTTGAAGAGCTTATGCAAATTTTTGTCGACCAGTGTGCCTTCATGGACTATTTCAAGAGCCACTGGCTAGCTAGTATAGATATGTGGATTAATGCCATAAAATCACTCCCCGTGACAACTCCTGAGACACATGCTGCAATAGAATCCTATCACCTAAATTTAAAATCCATTCTTTTGAAGGAGAATTATGCTAATTTCTGGTTAAGAGTTGATTGGTTGATCCACACTTTAACTACTGAATTTCACTCGTTATACTGGCTAGATCAATACAGTTTAGAGACTGGGTATTTTGAGAATCTACGGAACAATTCTTTCTCATCTAATGCTTGGTATCATGCTCTTCAAATTCCAGATGTGGATGTCATACTGGATGAGCAAAATCTCCATCTTTCCAAAGTTTTGTCTCAGACTGACAGAAGTTTAATGTATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCCAGGCTGGGAAACCTCTGTAAACATGTCATCAAGGTGGCCACTTTCTGCAGAAGCCGACAGGTTGCAAGACCATCATTGTCTGCTCAAGTTTATAAACAGGCTTTGCTGACTCTTCTTCATAATCCTCCTGATGATCCTTTAGTTCTGGATCATACAATTCTACATGTGACCCGTTTGCAACAAGACATTAAAGCCTTGGAAGAATTGTCCAACAGTGGATTGCTCCAGCCTATAGCTCCTGATTTGAGTTCTCCAATGACTGAAAATCCTCTTCCTTTTCAGCGCATCCAGTGA 2073 0.424 MPRMEDILNLPVQDPVCPEFSAAHINWVKLEGGRQGGDDIALIPFARVDDFVKGESSNPECPASFRVESRRKRPVGSIAKPRVDGYLEYTLYWCSYGPEDYRESDSGVGDGTSTKPASGKGSRPGRRHMMRGCLCHFTVKRLYTRPLIALIIYNQRKHVDKSGAPCHGLLDRDAVGTRAMYAPRISDELRQKVMYMLYVGISLDKIIQHHAEGMQKQGGPQNRDDFLTRNDVRNMERTIRNSSHELHENDEYSVKIWIQRHQKHVFYFQDNSGSEPFVLGIQTDWQLQQMLRYGNNSFLSFHSSFGLKKIKYPVCSLLVFNASQNAIPVAWIITSSFVGKAIHKWILLLSEKLRTKDPRWRPNAIVVDDPSLDYSIIREAFQCRILLCSWHVRRSWIKKLFKKCCNIEVQREMFRHLGWILYCTRGWPNAMDAVEELMQIFVDQCAFMDYFKSHWLASIDMWINAIKSLPVTTPETHAAIESYHLNLKSILLKENYANFWLRVDWLIHTLTTEFHSLYWLDQYSLETGYFENLRNNSFSSNAWYHALQIPDVDVILDEQNLHLSKVLSQTDRSLMYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVATFCRSRQVARPSLSAQVYKQALLTLLHNPPDDPLVLDHTILHVTRLQQDIKALEELSNSGLLQPIAPDLSSPMTENPLPFQRIQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01509 690 PANTHER ZINC ION-BINDING PROTEIN 1 688 - -
Cca03g01509 690 MobiDBLite consensus disorder prediction 104 126 - -
Cca03g01509 690 ProSiteProfiles Zinc finger SWIM-type profile. 576 610 IPR007527 GO:0008270
Cca03g01509 690 PANTHER ZINC ION BINDING PROTEIN 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01509 Cca-Chr3 33704410 33709281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01509 - - gmx:100779025 1349.34