Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01506 ATGCTGAGGAAGAGGAACAGGTCAGTGCTGAAGGATCAACACCACATGAGTAATCTGACACAGTGTGAAGCCAATTCGGAGCATTATTCTCAATCTCATCATGCTTTGGGGCGCAACAACATCAAGGGTCACTCAATTTTCAATGTCCCTTGTCTGTTTGTGGGTCTAGGTCCCAAAGCGGTGTTGGATTCTGATTCAGTTCGGAGCCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTCGGCAACTGTGTTAGGAAGCCAAGATCTTCACCCCATGAGGGGCACCAAAGGAGTTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGGGTCTTTGGAAGACTGTTCTAGGTTTTCTGGGAAAATTCTCCAGTCACCAGAGAGCAAGAGAGTTAGTCTCAGCCCCCAAATGATGATCAAACCCCCAAATTGCCACATCCATAGGGATTCTCTTGAGGCATCCAAGTCTTTGCCGAAAGATTTTTGTAAGACTCCATATCCCCAAAATGGATCTGTTATCCACAAGGGTGAGTCTAACTCTACTGTTCTTTTTGAGATTGGGGAAAGTGGTCTAGAGCATGAGCCTTTTGGGAGAACCAGGTCTTGTTCATTGGACTCATGCAGTCCAGTGAAGGCACTCTCTGGTTTGGCCACTTCCTTCTCTGAATCAGACACTGATAATTTTGCCATGAAAGATGTGAACATTCAAGTCTGCTCTCCTCCTCATTTTATTGGAGGAGGCCATACCCTCTCACCTGCAAAGCTAAATTCAACGACTCTTTCCATTTGCTCTTCCAATGAATTCATCAAGTCACTATCAGCTAGTGAGATTGAACTCTCTGAGGACTACACATGTGTGATCTCCCATGGTCCCAATCCGAAAACAACTCACATTTTTGGGGATTGCATTTTGGAGACTCACTCTAATGCATTTAAGAACCATTTTAAGAATGAAGAGAAGGAGAAGGGAGTGAACTCTGTGGGTAACAGGTTATGGAGTCCAAACCCATATCCCTCTAGTGACTTCTTAAGTTTCTGCCACCACTGCAACAAGAAATTGGAAGAGGGGAAAGACATTTATATTTATGGGGGTGAAAAAGCATTTTGCAGTTTGACTTGCCGTGCCATGGAGATCATGATTGATGAGGAACTAGAGAAATCCAATGCCAACCCTCCTTGTGAAAACTCTCCAAAGCCAAAACTTGGTGAGCTACTTTTTGAAACAGGCATACTCACTGCTACATAA 1251 0.4428 MLRKRNRSVLKDQHHMSNLTQCEANSEHYSQSHHALGRNNIKGHSIFNVPCLFVGLGPKAVLDSDSVRSPTSPLDARVLSNLGNCVRKPRSSPHEGHQRSWDCCKVGLGIVGSLEDCSRFSGKILQSPESKRVSLSPQMMIKPPNCHIHRDSLEASKSLPKDFCKTPYPQNGSVIHKGESNSTVLFEIGESGLEHEPFGRTRSCSLDSCSPVKALSGLATSFSESDTDNFAMKDVNIQVCSPPHFIGGGHTLSPAKLNSTTLSICSSNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHSNAFKNHFKNEEKEKGVNSVGNRLWSPNPYPSSDFLSFCHHCNKKLEEGKDIYIYGGEKAFCSLTCRAMEIMIDEELEKSNANPPCENSPKPKLGELLFETGILTAT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01506 416 PANTHER FCS-LIKE ZINC FINGER 11 1 410 IPR044585 -
Cca03g01506 416 PANTHER DUF581 FAMILY PROTEIN 1 410 - -
Cca03g01506 416 ProSiteProfiles Zinc finger FLZ-type profile. 343 387 IPR007650 -
Cca03g01506 416 Pfam zinc-finger of the FCS-type, C2-C2 338 385 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01506 Cca-Chr3 33688909 33691665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01506 - - gmx:100779553 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g00582 05 13437381 13444615 Cca03g01506 03 33688909 33691665 PCT