Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01502 ATGCAGGCTGCAGAAGATGCTGAGGGGCGAAACGCGCGTTTTGAGGAAAACGATTTGGACTTGGAAATTTCGAGGCTGCGTGGACGATGGGAGCTCGCTTCTGTTCTCAATTTTTTGGACGTGTTTGGTCCGATACTTGGTAAAGATTTGAAGCTTTCTGCCGAAGATATTGAGATTGGGCTTGTTAAGCCCGATGCATCACTTGCTCGGCTTCACATTCAAATTTTGAAGGGAATGCCACCTGTGAGTAAAACACTTGAAGAATCTGATAAATGGGTGACTTCACTCTGTAAGAAACTGACTATGTGGTGGCCATGGGTTGCTGAGGGGGAGATTCCACTTGTTCCATCTAAAGGAGAGGAGATATCCAAGTACAAGGAACTTAATCCATCAGATCGTTTACTACTGCTAAGAGCGCTTTGTGAAGTTAGAGCTGATCAACATGATGCAGTGTCATACATCAATGATGCTTTAAAAGAAGGAACCCAAATTTCCTCTTTTCGCAAAGATGCTTTGGGAAGAGATGGAACTGGCACATCTTACTGGTATGATGCAACTTCAAAAGGTCAGAGTCACAGATTGTACAGGGAAATTATCACATCAGACTCGATCCCAAAAGATAAGGATGAAAGACGTTTATCACTCCCCACCATTCAATGGGAAACACTTGCTTCCAATCTTGAAGATTTTTCTAAAGTAGCTGAAAATTTCACATTCAGCAAGTCTTCTGTGGAAGTTGCTGTTAGCATGAAGCTTCAAAGTGATGCTATTCCCACTCTTGAAAAGATTCGGAAGAAGAAAGAAAGAGCAATGAAGCAAAAGCAAAGGCAGGATAAACTGTTAAAAGATGTTCAGATTTCTCATTGTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGCCTATTAATTATACATTTGAAGCTTATGATCGAACAATGGAGGAGGCAATACAGCTAACAAATAAAAGGAAAAAGTCTCCTGTTGCTGACCAAGATAAAACCAGAGGATCAGAAGATAAATCCAACTCAAAAGATGTTTCAACAGATGGTGATTCCGAAAGGGATGTGTTCCCAGTATCTGATAGTGAAGATGACACTGGTTACAAAGTTGAGAATCATGGTAGCAGCGATGAGGATGGTGTTGATGGTGAGATGGGCAACTCAGAAGCACACTCAAGCCATGCAGTTTCTTATCCCAAGGGGGTTCGCTGCAGCAAGCGGTTAGCTGGAGTTGCTAGCCACACTATTTTAGAAAGCAGAGGGTTAACTACAAAGCAAAGATTGAGACAAAGACCCACCCGCAATTCTGCTATAGAATCTGTCATCGTATCTGATTCAGAAGACGAAGCATGTGAAGGGAAGACAGATTTGTCGGAGTCTAATTAG 1386 0.4228 MQAAEDAEGRNARFEENDLDLEISRLRGRWELASVLNFLDVFGPILGKDLKLSAEDIEIGLVKPDASLARLHIQILKGMPPVSKTLEESDKWVTSLCKKLTMWWPWVAEGEIPLVPSKGEEISKYKELNPSDRLLLLRALCEVRADQHDAVSYINDALKEGTQISSFRKDALGRDGTGTSYWYDATSKGQSHRLYREIITSDSIPKDKDERRLSLPTIQWETLASNLEDFSKVAENFTFSKSSVEVAVSMKLQSDAIPTLEKIRKKKERAMKQKQRQDKLLKDVQISHCSGNTRSCRTRRPINYTFEAYDRTMEEAIQLTNKRKKSPVADQDKTRGSEDKSNSKDVSTDGDSERDVFPVSDSEDDTGYKVENHGSSDEDGVDGEMGNSEAHSSHAVSYPKGVRCSKRLAGVASHTILESRGLTTKQRLRQRPTRNSAIESVIVSDSEDEACEGKTDLSESN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01502 461 Coils Coil 257 280 - -
Cca03g01502 461 MobiDBLite consensus disorder prediction 447 461 - -
Cca03g01502 461 MobiDBLite consensus disorder prediction 422 461 - -
Cca03g01502 461 MobiDBLite consensus disorder prediction 319 380 - -
Cca03g01502 461 MobiDBLite consensus disorder prediction 422 442 - -
Cca03g01502 461 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 20 369 - -
Cca03g01502 461 MobiDBLite consensus disorder prediction 319 401 - -
Cca03g01502 461 PANTHER REMODELING AND SPACING FACTOR 1 20 369 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01502 Cca-Chr3 33612573 33616949 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01502 - - gmx:100781163 624.394