Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01501 ATGATGGGAGGAGCAGCAGCCAAAACCCTAACAAATCTTTGCCCCTCTTTCCCATTCACAACCAAAACCCAAAACCCACTCACCCACCCCTCTCTCTCATTCCCTTCCACTCGTCTTCGCCACCGCCCCATTTCAGCCGTCGCCAACCCGGTCCAACCTCCGCCCACCACCGCCGAGTCAGCCACTCCGGGCCAGTACCGAGTCGACGTCCTCTCAGAATCGCTCCCCTTCATCCAGAAATTCCGCGGCAAGACCATCGTCGTCAAGTACGGCGGTGCCGCCATGAAGTCCCCGGAGCTGCAGGCCTCCGTGATCAACGACCTCGTCCTCCTCGCCTGCGTCGGCCTCCGCCCCGTCATGGTCCACGGCGGTGGCCCCGAGATCAACTCCTGGCTCGGCCGCCTCAACATCCCCGCCGTCTTCCGCGACGGCCTCCGCGTCACCGACGCCGACACAATGGAGATCGTCTCCATGGTCCTCGTCGGAAAAGTCAACAAAACCCTAGTCTCCCTCATTAACAAGGCCGGCGCCACCGCCGTCGGCCTCTCCGGCATGGATGGCCGCCTCCTCACCGCGCGCCCCAGCCCCAAGGCCGCCGACCTAGGGTTCGTCGGCGAGGTGGCCAGGGTGGACCCCGCCGTCCTCCGCTCCCTCATCGAGAGCAGCCACATTCCCGTGGTGACCTCCGTGGCGGCGGACGAGTTCGGACAGCCGTACAACATCAACGCCGACACCGTGGCCGGAGAATTGGCGGCGGCGCTGGGCGCGGAGAAGCTGATTCTGCTGACCGATGTTGCGGGGATTTTGGAAGATCGGAACGACCCTAACAGCTTGGTGAAAAAGATTGACATAAAAGGGGTGAAAAAAATGATGGAAGATGGCAAGGTCGGTGGTGGAATGATTCCGAAGGTTAATTGTTGCGTGCGATCGCTGGCGCAAGGGGTTACCACTGCGAGTATTATTGATGGTAGGGTTCCTCACTCTTTGTTACTCGAGATTTTGACTGATGAAGGTGCTGGAACTATGATCACTGGCTAA 1038 0.6031 MMGGAAAKTLTNLCPSFPFTTKTQNPLTHPSLSFPSTRLRHRPISAVANPVQPPPTTAESATPGQYRVDVLSESLPFIQKFRGKTIVVKYGGAAMKSPELQASVINDLVLLACVGLRPVMVHGGGPEINSWLGRLNIPAVFRDGLRVTDADTMEIVSMVLVGKVNKTLVSLINKAGATAVGLSGMDGRLLTARPSPKAADLGFVGEVARVDPAVLRSLIESSHIPVVTSVAADEFGQPYNINADTVAGELAAALGAEKLILLTDVAGILEDRNDPNSLVKKIDIKGVKKMMEDGKVGGGMIPKVNCCVRSLAQGVTTASIIDGRVPHSLLLEILTDEGAGTMITG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01501 345 PIRSF ArgA 58 345 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca03g01501 345 PANTHER N-ACETYLGLUTAMATE SYNTHASE 21 345 - -
Cca03g01501 345 PRINTS Glutamate 5-kinase family signature 115 129 IPR001057 GO:0005524|GO:0016301
Cca03g01501 345 PRINTS Glutamate 5-kinase family signature 242 269 IPR001057 GO:0005524|GO:0016301
Cca03g01501 345 PRINTS Glutamate 5-kinase family signature 295 315 IPR001057 GO:0005524|GO:0016301
Cca03g01501 345 PANTHER BNAC04G55460D PROTEIN 21 345 - -
Cca03g01501 345 Gene3D - 61 345 IPR036393 -
Cca03g01501 345 TIGRFAM argB: acetylglutamate kinase 85 320 IPR004662 GO:0005737
Cca03g01501 345 Pfam Amino acid kinase family 84 321 IPR001048 -
Cca03g01501 345 SUPERFAMILY Carbamate kinase-like 67 344 IPR036393 -
Cca03g01501 345 Hamap Acetylglutamate kinase [argB]. 83 338 IPR037528 GO:0003991|GO:0006526
Cca03g01501 345 CDD AAK_NAGK-C 70 343 IPR041727 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01501 K00930 - gmx:100780093 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01501 03 33609544 33610927 Cca03g01501 03 33609544 33610927 ECH