Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01485 ATGGCAACAAAAGCAAAAGACAGTAGTAGTGTAGTTGGGAAGGAGAAGAAGGCCACATCTTCAAACTCTCCCATCACAAGCACCAAAAAGGCCTCCACAACAAACAAGGCCACGTCAGGCCCATCAGAGAAACCAGTCCCCAACTACCTCAAGCCCACAATCAGCTCAGTGCGTCTTGAGTCTCACTCCTCCTTCAATCTTCCTAAGAATAACGATGGTGCCACCAAGCCCACTCTAAATAGAAGAAGATCTTTGGACCCATCATCTTCATCTTCATCTTCAAGGTTACCAAAACAAACACAACTTTCTCTTTCGAGACAACACAAGGCCCTTGTGTCCCCTGGCCCACGAGACAGAACCCTCACTCATCGATCTTCGAGTGTTCCAAGCAAAACTACCAACAACAACGCTTCAAAACTTGTTCCAGAGAGGCTCTCTAGGACCCCGAAGGAAGGGAGAACTCAGCCACTCGTTGCTAAGAGCACCAAGAAGGGAATAAGTAACAGCGTTTCTGCTTCAAGTACTAAGAAGGTGATAACTGATGATGCTTCAACAAAGAGTACAAGTGTTGGTGAAACTGAAACCACAAAAGCTGTTAGTGTTGAATCCGAACCACAAGTTAAAGAGGCTATAAGTGAAGAGGTTGTTGGAGAAGTGGAGAAAGTGGAGAATCAAGATGAACTTACAAGTCAAGTAGTTGATCATGGAGAGCATGATCAAAAGCTTGAGGAGTCTGATGAGCCTCATGTTCAAGCTGATGAGGACAAGGTCATTCCTACTCCTACAGTGTCagaagaagaagaacaacaagaagataaacaagaggaTGTTAATAATACAAACCAAGATGAGTGCAACATTAATGAGAGTAATCATGCAGAGGTTGATCACTCAACAACTGAAGCAGAAGTTATTGAGGTTAAAGAAATGgaacaagaacaagaacaagaacaacaagaacaagaacaagaacaaAAAGAAGGTGTGGTTGAAATAGAAGAAGATCATAAAGATGAGAGCAACAATGAGGAAAAGGTGGTGGAAGAGAAGGAGAGATCAGATGAAGAAGGAATAAATGAAGAGGTTAATAATAAGTTGAGGGAAGGAGAAGAAGAAGATGAACAAGTAGAGAGTGAAGTGAAAGAAGAAAAGGGTGAGTCAACAAAAGTAGAACAAGTAGAAGATAGTGAAGAGATGGAAAAGGGTGAGTCAACAAAAGTAGAACAAGTAAAAGATAGCGAAGAGGTGGAAGAGAATAAAGAGTCTCCCTCTCAGGTATCTAATGATGTGATTGAAGAAACTGCAGGGAAACTATTGGAAGCGAGGAGAAATAAGGTGAGAGCATTGGCTGGTGCATTTCAAACCGTCATTGACCATCAAACCAAGTGA 1389 0.4003 MATKAKDSSSVVGKEKKATSSNSPITSTKKASTTNKATSGPSEKPVPNYLKPTISSVRLESHSSFNLPKNNDGATKPTLNRRRSLDPSSSSSSSRLPKQTQLSLSRQHKALVSPGPRDRTLTHRSSSVPSKTTNNNASKLVPERLSRTPKEGRTQPLVAKSTKKGISNSVSASSTKKVITDDASTKSTSVGETETTKAVSVESEPQVKEAISEEVVGEVEKVENQDELTSQVVDHGEHDQKLEESDEPHVQADEDKVIPTPTVSEEEEQQEDKQEDVNNTNQDECNINESNHAEVDHSTTEAEVIEVKEMEQEQEQEQQEQEQEQKEGVVEIEEDHKDESNNEEKVVEEKERSDEEGINEEVNNKLREGEEEDEQVESEVKEEKGESTKVEQVEDSEEMEKGESTKVEQVKDSEEVEENKESPSQVSNDVIEETAGKLLEARRNKVRALAGAFQTVIDHQTK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01485 462 MobiDBLite consensus disorder prediction 380 422 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 1 431 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 119 142 - -
Cca03g01485 462 PANTHER EMB|CAB62594.1 1 461 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 54 108 - -
Cca03g01485 462 Coils Coil 263 283 - -
Cca03g01485 462 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 461 - -
Cca03g01485 462 Coils Coil 352 386 - -
Cca03g01485 462 Pfam Plant calmodulin-binding domain 342 457 IPR012417 GO:0005516
Cca03g01485 462 MobiDBLite consensus disorder prediction 289 371 - -
Cca03g01485 462 Coils Coil 300 327 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 160 202 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 14 42 - -
Cca03g01485 462 MobiDBLite consensus disorder prediction 207 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01485 Cca-Chr3 33368615 33372111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01485 - - ccaj:109807293 575.089