Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01484 ATGAAAAAAGTCCATTTGGGTGGTTCTCCTCGCCACAATCATTCACCTCTCTTCCCTCCATTTCTCTCTGTCACACCCATCTTTTCCAAACCCATGGCGGTTCTCGAAGGGGATAAGCACCAAGAGCAGCTTATTCCGGGCTTACCCAACGAAATTGCAGAGCTTTGTCTTCTTCACCTTCCCTACCCATACCAAGCACTCTCGCGCTCTGTTTCCTCCACCTGGAACAGAGCCATCACGCACCCTTCCTTCAAGAAAACCCTCTCCCACCCTCACCTCTTCGTTCTCGCCTTCCATTCGCAGACAGGACACTTCCAATGGCAAGCCCTCGACCCCTCCTCCGGCCGCTGGTTCCTTCTCCCGCAAATGCCCTTGCCGGACAAAATTCTCCCCACGGCGGTGGCCTGCGCGGCGCTGCCGCGCCAGGGGAAGCTCTTCGTGATGGTGGGCGGCGAGGAGGAGGGGGCTGCGACGACGATCGTGTACCGGGCAGGCACGAACCAGTGGTCGGCGGCGGCGGGCATGCCGGGGGCAAATAAAATCTTAATGGGGGTGGGAATGAGGGAAGGGTGGAGCGGGGTGAGCGTGGCGGTGGGCGGGAGGGTTTTCGTGATCGCGGAGTTCGGGGATTCCCCGGTGAAGGTGTACGAGGAGGAGTGCGACACGTGGCGGTGCGTGGGAGGAGGGAGGTTCCCGAGGGAGGTACTTAAGAGGCCGTTTTGTGCCACGGGGTTGGAGGATACAATCTACGTGGCGTCTTCCTGTTTGAACGTGGCCATTGGGACCGTCGACGTCACGCCTTCCGAGGTCAAGCTCACGTGGCAGGTGGTGGAGGCCCCGCCTGCTTTCCGTCAATTATCACCCTCTACTTGCCACCTTCTCTATGCTTGA 891 0.5937 MKKVHLGGSPRHNHSPLFPPFLSVTPIFSKPMAVLEGDKHQEQLIPGLPNEIAELCLLHLPYPYQALSRSVSSTWNRAITHPSFKKTLSHPHLFVLAFHSQTGHFQWQALDPSSGRWFLLPQMPLPDKILPTAVACAALPRQGKLFVMVGGEEEGAATTIVYRAGTNQWSAAAGMPGANKILMGVGMREGWSGVSVAVGGRVFVIAEFGDSPVKVYEEECDTWRCVGGGRFPREVLKRPFCATGLEDTIYVASSCLNVAIGTVDVTPSEVKLTWQVVEAPPAFRQLSPSTCHLLYA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01484 296 SUPERFAMILY F-box domain 42 101 IPR036047 GO:0005515
Cca03g01484 296 SUPERFAMILY Kelch motif 92 255 IPR015915 GO:0005515
Cca03g01484 296 SMART fbox_2 48 88 IPR001810 GO:0005515
Cca03g01484 296 Gene3D - 80 285 IPR015915 GO:0005515
Cca03g01484 296 Pfam F-box domain 47 86 IPR001810 GO:0005515
Cca03g01484 296 PANTHER F-BOX PROTEIN AFR 37 180 - -
Cca03g01484 296 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 183 296 - -
Cca03g01484 296 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 37 180 - -
Cca03g01484 296 PANTHER F-BOX PROTEIN AFR 183 296 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01484 - - ccaj:109807294 372.474