Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01476 ATGGATATCCGTGCCGATGCAGAAACCAGCTCCTTTTCAAGTTTGTTCGCTGCTGTGTCGTATGGATTTGCCTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATACTCAATGACTCTCCTCACTTTGCAGCAATTGGCTACCACCTTGCTTATACACTTCGGTAGAAAAATGGGATACACGAAAGCGAGAGGACCTGATATGACAATGGCCAAGCGACTGCTCCCGCTTTCAATTTTCTATAATGCTAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTTAATATTCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCATTGCTGGGTGTTTCTCTGGAAAGGGAAGACCTACAACTCAGGTGGCTCTTTCGGTGATATTGACAGCTGCTGGAGTTCTTATAGCTGCCCTTGGGGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTCGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCCGAGGACGGACTTTCATCCGTGGAAATCATGTTCTATAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTCATCATAGCCACTGGGGAATTCCCAAATTCTTTATCCCTATTATTTGCAAAGAGTTATTCTTTTTCATTTTTGGTGATCCTTATTCTTTCGTTGGTGATGGGCATCGTTCTTAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGGTAAGCTAG 816 0.4191 MDIRADAETSSFSSLFAAVSYGFASMAMVFINKAVLMQYAYSMTLLTLQQLATTLLIHFGRKMGYTKARGPDMTMAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFSGKGRPTTQVALSVILTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSLLFAKSYSFSFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVVSTVS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01476 271 Pfam Triose-phosphate Transporter family 23 268 IPR004853 -
Cca03g01476 271 PANTHER SOLUTE CARRIER FAMILY 35 12 270 - -
Cca03g01476 271 PANTHER JC8.12-LIKE PROTEIN 12 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01476 Cca-Chr3 33226342 33229763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01476 19 270 Lipid Metabolism Gene Families AT5G19980 27.612 1.42e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01476 K15281 - gmx:100777622 469.544