Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01472 ATGGCGCGAGTGTGTGTGTCTCTCACATTCCCGCGCGCGCTCCATTTCGCGATTCAGCGTCACTCTCATTCGTCGCTCTCTGGAAACTCTCTTCACTCTAAAATTTACAGTTACCGGGGAAGGGATCGATCGGTGATTGGTAGTGTTAGGGCTTTTCATTCGTCTTCTGCTAAACCCATGAGTTGGTGCGACGACGTTCAGGAACCACGTCTTCTCGTCGCGCCCGATCCTGGTTCAGATGGAAATGGTCTGGGACAGATGATTTTGCTCCGCCATCCTAAATCTGGAAATGCAACACAATATCTGTTTGTAAATGGAATGCTTCAAGAACTTCAGTGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGAGATTATGTAAGTGAAGATGGTCGGCTGTATTTATCCACGCCAATTGATCCTGTATTCATCATGTTGCCCATATTTGAGGAAGCTAGAATGAAGAAAGGGGATGATCTTGGGAGGTTCAGGCAATTGGATGAAATCTTGTTTATTGATGGGTATCCAGACTATATGCAGTTAATGTCTGTTGTGGAGAACTGTATGCAAGTAGTTTCTGAAGTCAAAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAGGTTATGCGTTGGCTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAAATTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTAATTGATGCGGTCTCTATATTAGGAGAGTATTTGAAGGAAGAGCCTTGGTTGCAGCTTTTGTGTATCCATCTTAAGTTAAATATACTTGAGGTTACTGGAAAAGCACAAGTAAATGGTGAAGGAAATAACAAAGCTTTATGTGAAGAATTTCAGGAACAGAAGGATGGTAAAAAGGCTACAACTGCAAAGAAAGGTAGACAAGCAAAGAAGGTAAAATTAGAGACAGAATCACATAACATCAAAGACATGTTTTCGAGGGCCTCCCGAAGGAAAAGCTAA 1005 0.4179 MARVCVSLTFPRALHFAIQRHSHSSLSGNSLHSKIYSYRGRDRSVIGSVRAFHSSSAKPMSWCDDVQEPRLLVAPDPGSDGNGLGQMILLRHPKSGNATQYLFVNGMLQELQWFKNLYGSWFLGDYVSEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRQLDEILFIDGYPDYMQLMSVVENCMQVVSEVKEVGSSKFFRLDDSKVMRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEPWLQLLCIHLKLNILEVTGKAQVNGEGNNKALCEEFQEQKDGKKATTAKKGRQAKKVKLETESHNIKDMFSRASRRKS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01472 334 Pfam Ydr279p protein triple barrel domain 86 140 IPR041195 -
Cca03g01472 334 Gene3D - 139 267 - -
Cca03g01472 334 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 143 229 IPR019024 -
Cca03g01472 334 Gene3D - 71 138 - -
Cca03g01472 334 CDD RNase_H2-B 71 224 IPR040456 GO:0032299
Cca03g01472 334 PANTHER RIBONUCLEASE H2 SUBUNIT B 54 332 IPR040456 GO:0032299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01472 K10744 - gmx:100792495 565.074