Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01470 ATGGTTTTCTGGGTTTTTGGCTACGGTTCACTGGTGTGGAACCCAGGGTTTGATTTCGATGAGAAGATTGTCGGTTTCATTAAGGATTACAGACGCGTCTTTGATTTAGCGTGCATTGATCACCGGGGAACCCCTGAAAAACCTGCAAGAACTTGCACATTAGAACAGAAAGAAGGGGCTATTTGCTGGGGAGCTGCTTATTGTGTTCGAGGAGGTCCTGAAAAGGAAAAGCTGGCTATGCAGTATTTGGAGCGACGAGAATGTGAATATGACCAAAAGACTATCGTAAGCTTCTTCAAGGAAGGAGATTCACTGCACCCTACTTTAACTGACGTAATAGTATTCACATCTACTCCAGACAAAGTTAACAACAAATATTACTTGGGACCTGCCCCTCTGGATGACATGGCCTGGCAAATAGCAACTGCTTATGGTCCTTGCGGAAACAACAGAGACTACCTTTTCCTTCTAGAAAAGGCCATGTATGATATCGGCCATGAGGACGACCTAGTGATAGAGCTTGCCAATGAAGTTAGGAAAGTACTTGGTGTGGGAAATGTAGTATCAAAGGAGAAGAAATCGGTTGGACCAGCACAACTTGCTCACCCTCCTCACGTACCGATTCCTTCTCGTCAACTGCACCCAATGCCAGAACCTATTGCATTGGATAGTTGA 675 0.4504 MVFWVFGYGSLVWNPGFDFDEKIVGFIKDYRRVFDLACIDHRGTPEKPARTCTLEQKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDQKTIVSFFKEGDSLHPTLTDVIVFTSTPDKVNNKYYLGPAPLDDMAWQIATAYGPCGNNRDYLFLLEKAMYDIGHEDDLVIELANEVRKVLGVGNVVSKEKKSVGPAQLAHPPHVPIPSRQLHPMPEPIALDS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01470 224 MobiDBLite consensus disorder prediction 194 224 - -
Cca03g01470 224 CDD GGCT_like 5 95 IPR013024 -
Cca03g01470 224 Gene3D - 1 167 - -
Cca03g01470 224 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 224 - -
Cca03g01470 224 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 224 IPR006840 GO:0003839|GO:0006751
Cca03g01470 224 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01470 Cca-Chr3 33170770 33173650 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01470 K22596 - gmx:100793027 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01470 03 33170770 33173650 Cca03g01470 03 33170770 33173650 ECH