Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01468 ATGAGCGTGAAGGTGAATTGTGTGAGTGGCGACACCCACAACGTGTTCGTTTACGGTAGTCTCTTGGCCGATGAGGTTGTCCAAACCCTATTGAAGCGCGTCCCTCCAACCGCACCCGCCATCCTTCAAGACTATCATAGGTTTAAGATTAAAGGTCGCGTTTATCCCGCTATTCTCCCCGTCCCCAATAACAAAGTTACTGGCAGGGTGCTTCTCGGCATCTCCGGACTCGAACTCAATATTCTAGATGACTTTGAGGATGTTGAATATACTAGAACTCATCTTCAGGTTTCCTTGATTGACAAGGCTGAAAATCTACAAGTTTACGCTTATGTTTGGAGCAACCCAAACGATCCCAACTTGTATGCAGAATGGGATTTTGAGGAATGGAAACAAGTTCACATGAATGATTTCGTCAAGATGACTGATGGCTTTATGCAAGAGTTGGAATTGCCAGAATCAAAGCCAAGAGTGCAGACTTACGAAACCTTCTACAAGCAAGAAAACGATAAGCCACCTGAACCTTGA 528 0.4489 MSVKVNCVSGDTHNVFVYGSLLADEVVQTLLKRVPPTAPAILQDYHRFKIKGRVYPAILPVPNNKVTGRVLLGISGLELNILDDFEDVEYTRTHLQVSLIDKAENLQVYAYVWSNPNDPNLYAEWDFEEWKQVHMNDFVKMTDGFMQELELPESKPRVQTYETFYKQENDKPPEP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01468 175 CDD GGCT_like 15 113 IPR013024 -
Cca03g01468 175 Gene3D - 2 119 - -
Cca03g01468 175 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 15 130 IPR009288 -
Cca03g01468 175 Gene3D - 120 169 - -
Cca03g01468 175 PANTHER AIG2-LIKE PROTEIN D 9 153 IPR045038 -
Cca03g01468 175 PANTHER BUTIROSIN BIOSYNTHESIS, BTRG-LIKE PROTEIN-RELATED 9 153 - -
Cca03g01468 175 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 12 136 IPR036568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01468 - - gmx:100527521 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01468 03 33160922 33163700 Cca03g01468 03 33160922 33163700 ECH