Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01467 ATGGTTGATCAACCAAGAACTGGAGCCTCTTACTATGGTTCGCCCTATGGAACATCCTACCAGACCAACAACAACAACAACCCACCTTCACGCCAAACCGTTAAGTTCATAACAGCCGCCACTATTGGCATCTCACTCTTGCTTTTGTCAGGGTTGGTCCTCACAGGAACTGTCATAGGGTTGGTCATAGCAACCCCTCTTCTTGTTATCTTCAGCCCCATCCTTGTCCctgctgcttttgtgctgtttctagttgctgctggcttcttattctctggtggctgtggtgtggctgccattgctgctTTGTCTTGGATTTACAACTATGTGGCTGGGAACCATCCTGCTGGTTCTGACACCTTTGACTATGCAAAAGGGTACCTTGCTGATAAGGCAAGAGATGTGAAGGAGAGGGCAAAGGATTATGGGAGTTATGCTCAGGGTAAACTTCAAGAGGCCACACAAGGATCTCATTGA 477 0.3962 MVDQPRTGASYYGSPYGTSYQTNNNNNPPSRQTVKFITAATIGISLLLLSGLVLTGTVIGLVIATPLLVIFSPILVPAAFVLFLVAAGFLFSGGCGVAAIAALSWIYNYVAGNHPAGSDTFDYAKGYLADKARDVKERAKDYGSYAQGKLQEATQGSH 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01467 158 MobiDBLite consensus disorder prediction 11 26 - -
Cca03g01467 158 ProSitePatterns Oleosins signature. 56 78 IPR000136 GO:0012511|GO:0016021
Cca03g01467 158 Pfam Oleosin 32 143 IPR000136 GO:0012511|GO:0016021
Cca03g01467 158 PANTHER OLEOSIN 20 156 - -
Cca03g01467 158 MobiDBLite consensus disorder prediction 1 26 - -
Cca03g01467 158 PANTHER OLEOSIN 20 156 IPR000136 GO:0012511|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01467 Cca-Chr3 33155770 33157214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01467 24 135 Lipid Metabolism Gene Families AT2G25890 61.607 1.27e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01467 - - gmx:100779237 221.476