Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01460 ATGGCGCCTCCGAAGCTCTTCGTCTTGGCGCTTTCAGTAACCCTAATTCTGGCCCTCGCCGGTGCCGAAGCCGATGTTTCCATCGAAGGAAGAACCAAAGAGCCTGATGCCTCCGCTTTCAAGATCCAATTAGATCAACTCTATTCTAAGATCCAAAGTCTCGAATCTCAAATCAGTGAAAAGTCTGAGGAAGTGAAGAACAAGGACGAAATTGTAGCAGAAAAAGAAAAAATCATTGAAGAGAGATCGTTAACCATAAAATCCTTGCAGAATGAAATTGCTTCTCTCCAGAAAAAAGGGTCGTTGGATGCCGAGGAGCAGGTTGGAAAGGCTCATGCACGTGCTGGTGAACTACAGAAGCAGGTGGACAAGCTTCAAAGGGAACTAGAGACACAAAACAAGGAGAAAGTGAACTGGGAAACTCGAGTACTTCAGTCAGAGAAAAAGATTCATGACTTGAACTCAAAATTAGAAGATATTCAAAAGATAAATGAGGAACAGAAGGCAAAAATTCGTAAAACTGAACGTGCTCTTAAAGTGGCTGAGGAAGAAATGGTGAATGCAAAGTTTGAGGCAGCTGCCATAGAAAAACAGCTGAGGGAGACCCATGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATATTCACAGTAAGTCCTATCTTGAGGCTCATTGGAACAAACATGGGAAACCTGCCTTTGAAACCTTTACTCAAAAGGCCCTAGAGAAAAAGGCACAAGCTGGAAAGTGGGCCGAGCCTCATGTGGAAACCATTAAAACTAAATGGATCCCGACTGTAAAAGAACACTGGTCTGTTGTGAAAACAAATGCTGAACCTCATGTGCAATTGGTGACCACGAAAACAGTTGAAGTTTACAAGGCATCAAAGAATGCTATTGCTCCCCACTTAAGCAAGGCAAAAGAATTTGTAGATCCTTATTATCAGGGAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGGTTGCTATTGCAGCTAAACCTCATGTTGACAAGGTACAAGCGGTTTTGAAGCCCTACACAAAGGTGGTTGTTCATGCTTATGGGAAGTTTTTGGAATCAGCTACTACATATCATCGCCAGGTCCAAGCTACTGTCCAAGAGACTCTGAAAAAGCACGACCTTACTAGACCTCTTGCTACTAAAGAGTTGGAATGGTTTGCGGCCTCTGCCCTTTTAGCTTTACCAATTATTTTTGTGGCTAGAGTGTTTTCAGCTGTTTTCTGCAGCAAAAAAGTGAATAAACCTGCTCGACATGGACACAGTCACCATGCACGACGTAAAGCTAAGCGAGGGCATCCAGACAAAGACAAGCAAACAGCATGA 1347 0.435 MAPPKLFVLALSVTLILALAGAEADVSIEGRTKEPDASAFKIQLDQLYSKIQSLESQISEKSEEVKNKDEIVAEKEKIIEERSLTIKSLQNEIASLQKKGSLDAEEQVGKAHARAGELQKQVDKLQRELETQNKEKVNWETRVLQSEKKIHDLNSKLEDIQKINEEQKAKIRKTERALKVAEEEMVNAKFEAAAIEKQLRETHGAWLPPWLAVHYIHSKSYLEAHWNKHGKPAFETFTQKALEKKAQAGKWAEPHVETIKTKWIPTVKEHWSVVKTNAEPHVQLVTTKTVEVYKASKNAIAPHLSKAKEFVDPYYQGARKFSKPYIDQVAIAAKPHVDKVQAVLKPYTKVVVHAYGKFLESATTYHRQVQATVQETLKKHDLTRPLATKELEWFAASALLALPIIFVARVFSAVFCSKKVNKPARHGHSHHARRKAKRGHPDKDKQTA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01460 448 Coils Coil 37 99 - -
Cca03g01460 448 Gene3D - 42 212 - -
Cca03g01460 448 MobiDBLite consensus disorder prediction 422 448 - -
Cca03g01460 448 PANTHER OS08G0519400 PROTEIN 1 443 - -
Cca03g01460 448 SUPERFAMILY Tropomyosin 32 201 - -
Cca03g01460 448 SUPERFAMILY Apolipoprotein A-I 199 378 - -
Cca03g01460 448 Coils Coil 108 198 - -
Cca03g01460 448 MobiDBLite consensus disorder prediction 422 440 - -
Cca03g01460 448 PANTHER OS08G0519400 PROTEIN 1 443 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01460 - - gmx:100781922 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01460 03 33069965 33078608 Cca03g01460 03 33069965 33078608 ECH