Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01457 ATGTCTGAGACTGAGGTAAATCCAACTATCAGCAAGTCAACTGGATTGCCTCGGAAGCGCTTCTATAGAGCACGAGCACACAGCAATCCACTGAGTGACTCTCACTTCCCTGTGCCAATATCACCCAGCCATGTTGACTATTCCCTCCATTACCCTCAGTTATTTCCCTCGTCTGGTCAAGCTGATAGTTCCAAAAAGATCCAGTTTGCTGATGTTGGTTGTGGTTTTGGAGGGCTGCTCATAAGTCTTTCCACTTTGTTCCCAGAAACATTGATGATTGGAATGGAACTTAGAGACAAAGTGACTGAGTACGTCAAGGAACGAATTTTATCTTTAAGGGTAGCAAATCCAGAGAAGAATCATCGCCGTAGGGTTATCAGTCCATTCTTGCTAGATGAGTATGCTTATGTTCTCGAGGTTGGTGGAATTATATACACGATTACCGATGTAGAAGAGCTTGGAGACTGGATGAAGTCTTGTCTGGAGAATCACCCTATGTTCGAAGCCCTGACTGAGAAAGAACTTGAAGCAGATCCAGTTGTGAAGCTTTTATGTTCTGCGACTGAAGAAGGCCAAAAGGTTGCTAGAAATGGGGGACAAACTTTCCAGGCTGTATTCAGACGCATTGCACCATCTGATCAAACATCCTAG 651 0.4439 MSETEVNPTISKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSHVDYSLHYPQLFPSSGQADSSKKIQFADVGCGFGGLLISLSTLFPETLMIGMELRDKVTEYVKERILSLRVANPEKNHRRRVISPFLLDEYAYVLEVGGIIYTITDVEELGDWMKSCLENHPMFEALTEKELEADPVVKLLCSATEEGQKVARNGGQTFQAVFRRIAPSDQTS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01457 216 Hamap tRNA (guanine-N(7)-)-methyltransferase [METTL1]. 16 209 IPR025763 GO:0008176
Cca03g01457 216 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 180 IPR029063 -
Cca03g01457 216 Gene3D Vaccinia Virus protein VP39 119 208 IPR029063 -
Cca03g01457 216 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 11 115 IPR025763 GO:0008176
Cca03g01457 216 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 118 211 IPR025763 GO:0008176
Cca03g01457 216 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 11 115 IPR003358 GO:0006400|GO:0008176
Cca03g01457 216 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 118 211 IPR003358 GO:0006400|GO:0008176
Cca03g01457 216 Pfam Putative methyltransferase 67 116 IPR003358 GO:0006400|GO:0008176
Cca03g01457 216 Pfam Putative methyltransferase 119 203 IPR003358 GO:0006400|GO:0008176
Cca03g01457 216 Gene3D Vaccinia Virus protein VP39 45 118 IPR029063 -
Cca03g01457 216 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 216 IPR003358 GO:0006400|GO:0008176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01457 K03439 - gmx:100806128 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01457 03 33041545 33043473 Cca03g01457 03 33041545 33043473 ECH