Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01452 ATGCAAAGTCTGCAAGAGAAGGCTTCTGAATGGAGTGGAGTTTCCACAGGGGAGGCTTATGGCATCGACGAGGGCAATTTGTTTGAGAAGCTGGGCCTCCAAACCTTCCTAAACCTCTCTACCAATTTCTACAACAGAGTGTACGAGGACAAGGAAGAGTGGTTTGGTTCGATATTTGCGAATTCAGAGAAAGAAAAGGCAATAGAGAAGCAGTACGAGTTCCTGGTCCAGAGAATGGGAGGTCCCACACTGTATTCTCAAAGAAGAGGGCACCCTGCTCTGATCGCACGACATCGAGCGTTTCCTTTGACGCATGAAGCAGCAGAGAGGTGGTTACATCATATGGGACAAGCGTTGGACACTACCCATGGCATAGATGATGACTCAAAGATCAAACTCATCAACTTTTTCAGGCACACCGCATATTTCCTTGTGGCTGGAGTTCAGCAGAAGGATCAAAACCTACACTTCGGACCATCTAAGGATGCAACCTTAAAGCAACACCCATGTAAAAACTTCTAG 522 0.4674 MQSLQEKASEWSGVSTGEAYGIDEGNLFEKLGLQTFLNLSTNFYNRVYEDKEEWFGSIFANSEKEKAIEKQYEFLVQRMGGPTLYSQRRGHPALIARHRAFPLTHEAAERWLHHMGQALDTTHGIDDDSKIKLINFFRHTAYFLVAGVQQKDQNLHFGPSKDATLKQHPCKNF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01452 173 Pfam Bacterial-like globin 26 142 IPR001486 GO:0019825
Cca03g01452 173 Gene3D Globins 1 151 IPR012292 GO:0019825|GO:0020037
Cca03g01452 173 SUPERFAMILY Globin-like 26 145 IPR009050 -
Cca03g01452 173 CDD TrHb2_AtGlb3-like_O 28 146 - -
Cca03g01452 173 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 158 IPR044203 GO:0005344|GO:0015671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01452 Cca-Chr3 32998299 32999428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01452 - - ccaj:109801449 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01452 03 32998299 32999428 Cca03g01452 03 32998299 32999428 ECH