Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01449 ATGGAGTATCGTCTGCTACCTATTTTTGCTTTCCTCAACCTTGCACTGGTGGCAACTCATGCTGCCTTACCTCCTGAAGTTTACTGGAAGTCGGTGCTTCCTACTACGCCAATGCCAAAAGCCATCACTGATATTCTTTACCCCGATTTTGTGGAAGAGAAAAGCACGTCAGTGAGCGTTGGAAAGGGATCAGGCGTAAACGTGCATGCAGGAAAAGGAGGTGGCACCAATGTGAACGTTGGTGGAAAAGGTGGTGGAGTTTCAGTGAGTACAGGCCACAAGAAGGGAAAACCCGTGTACGTTTCCGTTGGTCCAAAATCTCCATTTAATTACATATATGCTGCCACTGAAACCCAATTACACGATGACCCCAACGTGGCACTTTTCTTCTTGGAAAAGGACTTGCACCCCGGAACAAAACTCAACTTGCACTTCACCAAGACTTCAAACCAAGCCACGTTCTTGCCACGCCAAGTTGCTGATTCCACACCCTTTTCATCCGACAAAGTGGACGATATACTCAACAGGTTTAACGTCAAACCCGACTCGAAGGAGGCTCAGATCATGAAGAACACTATTAGTGAATGTGAAGAGGGTGGCATCAAGGGCGAGGAAAAGTATTGCGCCACCTCACTTGAGTCCATGGTTGATTTCAGCACTTCCAAGCTTGGAAAAAACGTTGAGGTTGTGTCCACTGAAGTGGACAAAGAAACGGGGTTGCAGAAATACACTATAGCACCGGGAGTTAAGAAGTTGGCAGGGGACAAAGCTGTTGTGTGTCACAAGCAGAATTACCCTTATGCTGTTTTCTACTGTCACAAAACTGAGACCACAAAAGCTTACTCTGTGCCTTTGGAGGGTGCAAATGGGATCAGAGTTAAAGCTGTAGCAGTGTGCCACACTGACACGTCACAATGGAACCCTAAACATTTGGCCTTTCAGGTGCTCAAAGTTAAGCCAGGAACTGTTCCTGTTTGCCACTTCCTTCCTGAGGATCATGTTGTTTGGGTTTCCAAGTAG 1020 0.4676 MEYRLLPIFAFLNLALVATHAALPPEVYWKSVLPTTPMPKAITDILYPDFVEEKSTSVSVGKGSGVNVHAGKGGGTNVNVGGKGGGVSVSTGHKKGKPVYVSVGPKSPFNYIYAATETQLHDDPNVALFFLEKDLHPGTKLNLHFTKTSNQATFLPRQVADSTPFSSDKVDDILNRFNVKPDSKEAQIMKNTISECEEGGIKGEEKYCATSLESMVDFSTSKLGKNVEVVSTEVDKETGLQKYTIAPGVKKLAGDKAVVCHKQNYPYAVFYCHKTETTKAYSVPLEGANGIRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01449 339 Pfam BURP domain 128 337 IPR004873 -
Cca03g01449 339 ProSiteProfiles BURP domain profile. 129 339 IPR004873 -
Cca03g01449 339 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 72 337 - -
Cca03g01449 339 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 7 55 - -
Cca03g01449 339 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 72 337 IPR044816 -
Cca03g01449 339 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 55 IPR044816 -
Cca03g01449 339 SMART BURP_2 127 339 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01449 Cca-Chr3 32958461 32963445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01449 - - gmx:100301893 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01449 03 32958461 32963445 Cca03g01449 03 32958461 32963445 ECH