Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01441 ATGGTGTTCTACTTCAAAGCGCGCCCTGAAGCCGGCGATTACACCATCTTCATGGGCCTCGACAAGTTCGAGAACGAGGAACTCATCAAATACGGTTTTCCCGAAGACATCTGGTTCCATGTTGATAAAATGTCCTCAGCCCATGTCTATGTCAGGCTGCACAGGGGCCAGACTATTGATGGCATGAGTGAGGGTTTACTGGAAGATTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAAGGAAATAAAGTGAACAATATTGATGTTGTTTACACTCCCTGGTCTAACTTAAAGAAAACAGCTTCAATGGACGTTGGTCAAGTTGGTTTTCACAACCCAAAAATGGTTCGAACTGTGAGAGTTGAGAAGCGGATAAATGAGATTGTTAACAGGCTAAACAAGACAAAAGTGGAAAGGAAACCTGATTTGAAAGCTGAGCGAGAAGCAGTTAATGCAGCTGAAAGAGCCGAGAGAAAACAACAACTGAGAGAAAAGAAACGCCGTGAGGAAATGGAAAGACTTGAAAAGGAAAGACAAGCGGAACTTAGGAGCTACAAGGGTTTGATGGTCGCAGAAAACATGACATCCAACAAAGATATTGCATCAGGAAGCAAATCCTTGCAGGAACTGGAGGAAGATTTCATGTAA 648 0.4306 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHRGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNIDVVYTPWSNLKKTASMDVGQVGFHNPKMVRTVRVEKRINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKQQLREKKRREEMERLEKERQAELRSYKGLMVAENMTSNKDIASGSKSLQELEEDFM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01441 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Cca03g01441 215 Coils Coil 149 184 - -
Cca03g01441 215 MobiDBLite consensus disorder prediction 143 178 - -
Cca03g01441 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Cca03g01441 215 MobiDBLite consensus disorder prediction 196 215 - -
Cca03g01441 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01441 - - twl:119993227 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01441 03 32821863 32825885 Cca03g01441 03 32821863 32825885 ECH