Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01427 ATGGCCATGGCGATTAGGGTTTTTCTCACCCTTCTACTCTTTCTCATATCCACTCATCTCACTTCTTCGCTTTACGAAGATCAAGTTGGCCTCATGGATTGGCACCAACAGTACATAGGGAAAGTGAAGCACGCTTTGTTCCATACTCAAAAGACTGGGCGAAAGCGTGTTTTAGTGTCCACCGAGGAGAATGTTGTAGCTTCACTCGACCTTCGTCATGGAGAGATTTTTTGGAGGCATGTTCTTGGGACCAACGATGTTGTTGATGGGCTTGATATTGCCTTGGGAAAATATGTCATAACTCTTTCCTCGGATGGAAGTATATTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCAGGGCTCAAAGGCCTCAAAGTCAATACTATACATTCCAAAAAACCTGAAAGCTGACAAGGATGATTTGATCCTTGTTTTTGGTAAAGGTTGTCTCCATGCTGTTTCCAGCATAGATGGTGAAGTTCTTTGGAGGCAGGATTTTGCAGGTGAAAGCATTGAGGTTGGCCATATTATTCAGTCCACTGATGAGATCTATGTAGCGGGTTTTATTGGTTCTTCAGAGTTTTATGTGTATGGATTGAATGCTAAGAATGGAGAATTGCTAAAGAAGGATCATACAACACTTCCCTGTGATACTTTTGGGGAATTATTAACAATCTCAAGTGATAAGTTTGTGGTATTGGATAATATGAGGTCTAAGATACTAACAATAAAAATCAAGAATGGTAAGATTAGTTACAACCAAAAGCCTATTTCAGACCTCATCAAGGATTCATCTGGACAGGCAGTAATAGTACCATCAAGGCTCCCAGAGTTGTTTGCATTACAAATCAATTCCCATGTTCTTTTAATTAAAGTGACAAACGAAGGTGATTTGGTGTTAGTGGACAAAATTAATAATGTTGCAGCTTGTAGTGATGCTTTGTCAATTTCAGAGGGTCAACATGCTTTTGCATTTGCTCAACACGAAGACAGTAAAATTTTCCTTTTTGTTAAGGATGTTAGTGATTGGAATGGTGATTTGCTCAAGGAAAGTATAATAATAGACCAACAAAGAGGGAACATTGATAAGATTTTTATAAACAATTATTTGAGGACAGATAGATCTTATGGTTTTAGAGCATTGATGGTAATGGAGGATCATTCACTCTTATTAGTACAGCAAGGGGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCATCAGTTGTAGATGTAACAACGTCAGAACTACCTGTGGAAAAGGAAGGTGTATCTGTGGCAAAAGTTGAACAGAACCTCTTTGAATGGCTTAAGGGACATGTGCTGAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTAGCTATTCAAGCACTGAGGTTGAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCGGGAAAGGTTTTTGCTTTGCACACTGGAGATGGACGTGTAGTTTGGTCTATTCTACTTCATACTCTGCGGAAAACAGAAGTGTGTGTACATCCGGTTGGGCTTAACATTTATCAGTGGCAGGTTCCACATCATCATGCATTGGATGAGAATCCATCTATCCTTGTAGTTGGGCGATGTGGACCAAGTTTGGCTACTCCAGCTGTTCTTTCTTTTATTGATGCATATGCTGGGAAGGAACTCAATTCTTTGAGCCTTGCCCATACTGTTGCTCAAGTTATTCCACTGCCATATACTGATTCAACTGAACAGCGTCTGCATCTAATTATTGACATAAACCAGCATGCATACCTATACCCAAGAACTCCTGAAGCTATTGACATTCTGCAACGAGAATTTTCAAATGTGTACTGGTACTCAGTCGAGGCTGATAATGGTGTTATCAGAGGTCATGCCTTGAAGAGCAATTGCATTCACATAGTAGATGAATACTGCTTTGACTTCAGGGATTTATGGTCTATTGTGTTCCCATCTGAATCAGAAAAGATTATTGCAACAGTGACAAGAAAATCAAATGAGGTTGTTCATACCCAAGCAAAAGTTATGACTGACTATGATGTCATGTATAAGTATGTATCGAAGAATGTACTTTTTGTTGCAAATGCAGCACCAAAAGCCAGAGGGGAAATTGGAGCAGCCACCCCAGAGGAGGCATGGTTGGTCATTTATATCATCGATACTGTGACTGGTCGCATATTGCATCGCATGACTCATCATGGTTGCCAGGGTCCTGTTCATGCTGTATTTAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTCAGAGCACACAGATACGAGATGTCAGTTGTTGAGGTCTATGATCAGTCTCGAGCGGATAACAAAGATGTCTGGAAGTTTGTTCTTGGGAAGCATAATCTTACATCACCCATTTCTTCTTATTACCGACCAGAAGTTACAACAAAATCACAGTCATACTTTTTTACCCATTCTGTGAAAGCAATAGAAGTGACTTCGACAGCCAAGGGTATAACCTCTAAGCAGCTTCTTATTGGTACAATCGGTGATCAGGTTTTGGCACTTGATAAACGCTTCTTGGATCCACGACGCACACTTAATCCCTCGCAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACTGATTCATTGCCCATCATTTCTCAGACCTATATTACACATTCCCTTAAAGTGGAAGGTCTCCGAGGCATTGTAACAGTGCCCGCCAAGCTGGAGTCTACTTCCCTCGTCTTTGCCTATGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCACTAACAGAGGATTTCAGCTATGCTTTACTTCTTCTAACAATTGTTGCACTAGTAGCTGCAATATTTGTCACTTGGGTATTATCTGAGAGGAAAGATCTACAAGAGAAATGGAGATGA 2949 0.4049 MAMAIRVFLTLLLFLISTHLTSSLYEDQVGLMDWHQQYIGKVKHALFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGLDIALGKYVITLSSDGSILRAWNLPDGQMVWESSLQGSKASKSILYIPKNLKADKDDLILVFGKGCLHAVSSIDGEVLWRQDFAGESIEVGHIIQSTDEIYVAGFIGSSEFYVYGLNAKNGELLKKDHTTLPCDTFGELLTISSDKFVVLDNMRSKILTIKIKNGKISYNQKPISDLIKDSSGQAVIVPSRLPELFALQINSHVLLIKVTNEGDLVLVDKINNVAACSDALSISEGQHAFAFAQHEDSKIFLFVKDVSDWNGDLLKESIIIDQQRGNIDKIFINNYLRTDRSYGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLHTLRKTEVCVHPVGLNIYQWQVPHHHALDENPSILVVGRCGPSLATPAVLSFIDAYAGKELNSLSLAHTVAQVIPLPYTDSTEQRLHLIIDINQHAYLYPRTPEAIDILQREFSNVYWYSVEADNGVIRGHALKSNCIHIVDEYCFDFRDLWSIVFPSESEKIIATVTRKSNEVVHTQAKVMTDYDVMYKYVSKNVLFVANAAPKARGEIGAATPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKDVWKFVLGKHNLTSPISSYYRPEVTTKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQTYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQEKWR 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01427 982 Gene3D - 32 340 IPR015943 GO:0005515
Cca03g01427 982 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 488 764 IPR011047 -
Cca03g01427 982 SMART ire1_9 189 218 IPR018391 -
Cca03g01427 982 SMART ire1_9 142 172 IPR018391 -
Cca03g01427 982 SMART ire1_9 482 513 IPR018391 -
Cca03g01427 982 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 756 IPR011047 -
Cca03g01427 982 Pfam ER membrane protein complex subunit 1, C-terminal 764 981 IPR011678 -
Cca03g01427 982 PANTHER UNCHARACTERIZED 7 982 IPR026895 GO:0072546
Cca03g01427 982 Pfam PQQ-like domain 53 131 IPR002372 -
Cca03g01427 982 Pfam PQQ-like domain 146 316 IPR002372 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01427 K23562 - gmx:100790095 1814.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01427 03 32656505 32665826 Cca03g01427 03 32656505 32665826 ECH