Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01419 ATGAAGATGGCAGTAGGTAAGAGAGTCATGTACGTGTTTTTGACTGCATTTTTGTGGTTGAATGCTCAACATGCTTTTGTGAGCTGTACTTTGACATCAGAGTTGCAAAGCAAAATTGCTAAAGTAAACCAAGAGGGTCCTTATCTAGGTTTAATCATACCAAATTCGTTTGAACTAGACCCTCTTCTTAACAATCCAGGCTACACTGCTAGTGATACCATCATAGATGTCGCAGGAAGGAGATTCCGGTTTGGAGCCATTGGCGATCAGTCTGTGATTTTGGTCATGACAGGCTTGAGTGTGATAAATGCAGCTATAACGACTCAGCTTCTGTTGAGTTTATTCTCAGTAGAAGGAGTGGTGCATTACGGCATTGCTGGAAATGCAAACCCCTCCTTGCATATTGGAGATGTAGCCATTCCCGAATCCTGGGCTCATCTTGCACTTTGGAGCTGGCAGAGGTATGGATTAGGGGCAGATAATACATTACCATTGGAAGACAATGGAGACTACACGAGGGAATTCGGATACATAAAATTTGCAGATTTCACCTCAAACGTGACTGGGGACAGTCCAGTTGACAACCAACTAAACAATATATGGTACCAACCAGAGGAGATTTTTCCCGTTGATGGCACTCCAGAACAAAGGCAACATGCCTTCTGGGTTCCGGTTGATTCCAAATACTACCACATTGCTAAAAAATTGGAGGGCTTGGAGCTAGAGTCATGCATAAACGCGACGACGTGCTTATCAACAACACCAAAGGTGGAGCTTGTGAAACGAGGCATTAGTCAAAGCATATACCTAGACAATGCAGCATATCGTTCTTTCATCTACAACAAATTTGAAGTGAGTCCAGTGGACATGGAAAGTGCATCGGTGGCTCTTATATGCCTTCAACAAAGGCAACCCTTCATTGCCATTAGGGCACTCTCCGACTTGGCCGGTGGTGGCTCCGCCGAGTCCAACGAGGCTGATACCTTCTTGTCAATCGCTGCCACCAACTCCGTCACCGTTGTCATTGAGTTTGTCAAGCTCTTGTCACTTCACTCTAAGTCCTGGTCCATGTAA 1074 0.4497 MKMAVGKRVMYVFLTAFLWLNAQHAFVSCTLTSELQSKIAKVNQEGPYLGLIIPNSFELDPLLNNPGYTASDTIIDVAGRRFRFGAIGDQSVILVMTGLSVINAAITTQLLLSLFSVEGVVHYGIAGNANPSLHIGDVAIPESWAHLALWSWQRYGLGADNTLPLEDNGDYTREFGYIKFADFTSNVTGDSPVDNQLNNIWYQPEEIFPVDGTPEQRQHAFWVPVDSKYYHIAKKLEGLELESCINATTCLSTTPKVELVKRGISQSIYLDNAAYRSFIYNKFEVSPVDMESASVALICLQQRQPFIAIRALSDLAGGGSAESNEADTFLSIAATNSVTVVIEFVKLLSLHSKSWSM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01419 357 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Cca03g01419 357 Gene3D Nucleoside phosphorylase domain 49 347 IPR035994 GO:0003824|GO:0009116
Cca03g01419 357 PANTHER BARK STORAGE-LIKE PROTEIN 3 352 - -
Cca03g01419 357 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 3 352 - -
Cca03g01419 357 CDD MTAN 49 344 - -
Cca03g01419 357 Pfam Phosphorylase superfamily 49 345 IPR000845 GO:0003824|GO:0009116
Cca03g01419 357 SUPERFAMILY Purine and uridine phosphorylases 45 348 IPR035994 GO:0003824|GO:0009116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01419 Cca-Chr3 32541983 32546231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01419 - - gsj:114415138 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01419 03 32541983 32546231 Cca03g01419 03 32541983 32546231 ECH