Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01409 ATGGGTCAAGAATTGTCGTCAATATTTCAGTATGAGAAAAAGAGATTATTATGGCTTATTGGCATAACCTTTGCAATGATTTTAGCATTCCATTATTTCGAGCTTCCTTATGTTGAGGTTCAACCCCTTGTATTCTCTGACAACAAGATACCAACATCAGATAGTATTAGATTCCGAGCTGCAAATCTGCCTTCTGAGTCTGAAATGTTTAACAATATGACAACTTTGAAGCAAGAAAATTCTACTGGTCAAAATGCCTTTGAGATTGTTCATGAAACTAGGACTTCTGAGGAAAAGGACAGTGCTTCAAGAACTGGTCTCATCTCAGAACCAGGAAGGGAATCAAACAGATCTTCAGGAATTGATGCAACTGATGACAGTTCAACTTTGGTATCAAATAATGGTTCTGTAATAGAGAAGGCAGGAAATCTATCCCTGAGCACTTACAACGATACTATTTCTCATTCAATAATACCAACTTATTTAGCTCCACCTCTAAGTCCAACAAAACTGAGCCCAAATATTACACCTCCAATGTTATCACATGATTATGAGGAAACTGATTCTGAGGTGGATGAGACGTTGAGGACATTACAAGATGATGTCAATATACTAGACAATGATTCTTCTATCAACAGTGTGCCTAAGGGGACTAAAGATTCTCAAATACCAGTTCCGAAAGTAACAACAATCTCTGAAATGAACGAGTTATTGCTTCAGAACCGTGCCTCATATAGTTCTATGAGGCCAAGGTGGTCTTCTGCTGTTGATCAAGAGCTACTGAAGGCCAGATTAGAGATTGAAAATGCACCAATTATAAATGATGTTGCAAATCTTTATGCTCCTCTTTTTCGAAACATTTCCAGGTTCAAGAGGAGCTATGAATTAATGGAAAGAACTCTTAAAGTGTACGTGTATAGAGAAGGATCTAAGCCCATAATGCATTCACCATATCTTTTGGGAATTTATGCTTCTGAGGGATGGTTCATGAAGCAGATGGAAGGTAGTAAACAATTTGTGACTAAAGACCCAAAGAAGGCCCACCTATTTTACTTACCTTTCAGTTCTCGGATGCTAGAGGAAACATTGTACGTACAAAATTCACATAGTTCTAGGAACCTGATTCAGTATCTGAAGAATTATGTAGACATGATTGCTGGGAAGCATCATTTCTGGAACAGAACAGGAGGTTCTGATCATTTTCTTGTTGCTTGCCATGACTGGGCCCCTACAGAAACAAAGCGACACATGGCCAAGTGCTTAAGAGCCCTATGCAATGCTGATGTCAAAGAAGGTTTTGTCTTGGGGAAGGACGTGTCTCTTCCTGAAACCTTTGTCCGCAGTGCTCAGAGGCCTACTAGAAACATTGGTGGAAACAAAGTTTCAAAGAGGAAAACTCTGGCATTTTTCGCAGGGGGAATGCATGGTTATGTTAGGCCAATCTTGTTGCAGCACTGGGAAAATAAAGACCCTGACATGAAAATCTTTGGGACACTGCCAAGGTCTAAGGGAAACAGGAACTACATCCAGTACATGAAGAGCAGCAAGTACTGTATTTGTGCAAAGGGCTATGAGGTGAATAGTCCAAGAGTTGTGGAGGCCATCTTCTATGAGTGTGTGCCTGTTATTATATCAGATAACTTTGTGCCTCCATTTTTTGAGGTTTTGAACTGGGAATCCTTTGCTGTTTTTGTTTTGGAGAAGGATATTCCAAATCTGAAGAACATACTCATTTCCATACCGCAAAAGAGGTATCTTGAAATGCAGATGATGGTGAAAAGGGTGCAGCAGCATTTCCTTTGGCACAGGAGCCCTGTTAAGTATGATATATTCCACATGATACTTCATTCTATTTGGTACAACAGAGTCTACACTGCAAGAGCTAGATAG 1890 0.3979 MGQELSSIFQYEKKRLLWLIGITFAMILAFHYFELPYVEVQPLVFSDNKIPTSDSIRFRAANLPSESEMFNNMTTLKQENSTGQNAFEIVHETRTSEEKDSASRTGLISEPGRESNRSSGIDATDDSSTLVSNNGSVIEKAGNLSLSTYNDTISHSIIPTYLAPPLSPTKLSPNITPPMLSHDYEETDSEVDETLRTLQDDVNILDNDSSINSVPKGTKDSQIPVPKVTTISEMNELLLQNRASYSSMRPRWSSAVDQELLKARLEIENAPIINDVANLYAPLFRNISRFKRSYELMERTLKVYVYREGSKPIMHSPYLLGIYASEGWFMKQMEGSKQFVTKDPKKAHLFYLPFSSRMLEETLYVQNSHSSRNLIQYLKNYVDMIAGKHHFWNRTGGSDHFLVACHDWAPTETKRHMAKCLRALCNADVKEGFVLGKDVSLPETFVRSAQRPTRNIGGNKVSKRKTLAFFAGGMHGYVRPILLQHWENKDPDMKIFGTLPRSKGNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVFVLEKDIPNLKNILISIPQKRYLEMQMMVKRVQQHFLWHRSPVKYDIFHMILHSIWYNRVYTARAR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01409 629 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 171 626 IPR004263 GO:0006486|GO:0016757
Cca03g01409 629 PANTHER EXOSTOSIN FAMILY PROTEIN 171 626 - -
Cca03g01409 629 MobiDBLite consensus disorder prediction 108 132 - -
Cca03g01409 629 MobiDBLite consensus disorder prediction 92 132 - -
Cca03g01409 629 Pfam Exostosin family 298 578 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01409 Cca-Chr3 32443714 32448283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01409 - - gmx:100818271 1065.06