Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01408 ATGGATCGGAGGTTTAGATTTCTGTGTCAGCCAGAAACTACGAGATTAGTTTCACTCATTGGAATAACAGTGGCTATAGTATTAATGGTTCAGTATTCTGAACTTCCAACTACTAAATTATTATCTTCTCTTACTACCAAGATTACTACTTTCGCAATGGATGCATCTACGCTTAATTCTAAAGTGGAGGGTAACAATATGTACCTAAATGGTTCAAATTCAAACTCTACGCATGGGTTGGAAGAAACAAAAATTAGTCCTCAGGCCTCCCTTTCAGGACTTGATGGTGTTGTCAATTTTACAACCAGAGATGATGGTTCTCCAATTGCTAGTGTTCAGGGAAGATCACAACCTATGGTGCCATTGCCCAATAGAACATCCTTAGATTCAGGAACGGATCCCGGTAGTCCTTTGGCATCTAACACTTCAGATGCAACTTCAATGAAATCCAATGCCAACGATCCAGTTTACAATGATGGAAACTCAGGTTCTTTGCAAGGTAGTAGTAATTCGACATTCAATAGTGGTAAGCAAGGGACTGCAAAGAGTTCCAAAAAGAAGCCATCTATAGTAGTTTCAATATCTGAGATGAACTTGCAGTTGCAGCACAATCATGATTCTTCCCAGCTAGTGAAACCAGCAAGGTCTTCAGCTGTTGAAATGGAAATATTTCGTGCAAAATCAGAGATTTTAAATGCACCCATTATTATGAATGATTCAAGACTTTACTCACCTTTATACAGGAATGTCTCCATGTTCAGAAGGAGTTATGAACTAATGGAGAAGATTCTCAAAGTTTTCATCTACCAGGATGGAGACAGACCAATCTTTCATGAGCCCTTGCTGGATGGAATATATGCATCTGAAGGATGGTTCATGAAATTAATGGAGGCAAACAAACAGTTTGTCACAGGAGACCCTGGGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGCAAACTCTCTATGTGCCTAATTCACACAAACGTTCAAACTTAATTGAGTACATGAAAAGTTACGTGAACATGATTGCTGCAAAGTATCCTTTCTGGAATAGAACTTCAGGAGCAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACAAGAGGGCGTATGCTTAGTTGCATCAGGGCCCTCTGCAATGCTGACATTGAAGTAGGATTCAAGATAGGCAAGGATGTTTCTCTTCCAGAAACATACATAAGGTCAAGTGAGAATCCTGTCAAAAATATAGGAGGCAATCCTCCTTCTGAGAGGCCTATCTTGGCTTTCTTCGCAGGAGGTTTGCACGGTTACGTTCGACCAGTTCTGTTGGAGCACTGGGAGAACAAAGAACCTGACATGAAAATAACTGGTTCCTTGCCACATGTCAGGGGTAATAAAAACTACATCCAGCTCATGAAGAGCAGCAAGTTCTGCATCTGTGCAAGAGGTCATGAAGTTAATAGTCCCCGTGTGGTGGAAGCTATATTCCATGAGTGCATTCCAGTTATCATATCTGACAATTTTATTCCTCCTTTGTTTGAGATTTTGAACTGGGAATCTTTTGCTGTGTTTGTAACGGAGAAAGACATCCCTAATTTGAGGAACATACTGCTGTCCATCTCTGAAGAAAGATACTTAGAGATGCATAAGAGGGTTAAAAAGGTACAAGAGCATTTTCTCTGGCATGCTGAACCTGTAAAGTATGATTTGTTTCATATGCTTCTTCATTCAATTTGGTACAATAGACTTTTCCATATAAGTCAGCCATGA 1779 0.4013 MDRRFRFLCQPETTRLVSLIGITVAIVLMVQYSELPTTKLLSSLTTKITTFAMDASTLNSKVEGNNMYLNGSNSNSTHGLEETKISPQASLSGLDGVVNFTTRDDGSPIASVQGRSQPMVPLPNRTSLDSGTDPGSPLASNTSDATSMKSNANDPVYNDGNSGSLQGSSNSTFNSGKQGTAKSSKKKPSIVVSISEMNLQLQHNHDSSQLVKPARSSAVEMEIFRAKSEILNAPIIMNDSRLYSPLYRNVSMFRRSYELMEKILKVFIYQDGDRPIFHEPLLDGIYASEGWFMKLMEANKQFVTGDPGKAHLFYIPFSSRLLQQTLYVPNSHKRSNLIEYMKSYVNMIAAKYPFWNRTSGADHFVVACHDWAPAETRGRMLSCIRALCNADIEVGFKIGKDVSLPETYIRSSENPVKNIGGNPPSERPILAFFAGGLHGYVRPVLLEHWENKEPDMKITGSLPHVRGNKNYIQLMKSSKFCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPLFEILNWESFAVFVTEKDIPNLRNILLSISEERYLEMHKRVKKVQEHFLWHAEPVKYDLFHMLLHSIWYNRLFHISQP 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01408 592 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 146 589 IPR004263 GO:0006486|GO:0016757
Cca03g01408 592 MobiDBLite consensus disorder prediction 102 188 - -
Cca03g01408 592 MobiDBLite consensus disorder prediction 104 188 - -
Cca03g01408 592 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 146 589 - -
Cca03g01408 592 Pfam Exostosin family 262 541 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01408 Cca-Chr3 32435616 32439098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01408 - - gmx:100817335 988.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01408 03 32435616 32439098 Cca03g01408 03 32435616 32439098 ECH