Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01404 ATGAGAGCACTGCTTCAGCTTCAGGCTTTGACAAGTCGGGTTTCACTTTCGTCCTCCACCTTTGTTCGCGGCAAAAGCTTATGGTTTGATGCAAATGCAAACGCAAATAGAGCGCACAGAAGGATATGGACTTCCACTCCTCTTTGTATGGGCCGAAGATCCAGCAAAATTGCTGGCAGAAAGGAAGCCCAAGATGCAAAGAAGGCCAAACTATACTCAAGGATTGGAAAGGAGGTTGTGTCTGCTGTAAAGAAAGGTGGTCCTAATGTAACATCTAATTCTGTTTTGGCTGCTTTACTTGAGAAAGCCAAGGAGCTTGATGTGCCTAAAGATATTGTTGAGCGCAATATCAAGAGAGCTACCGAGAAGGGACAAGAGGCTTATATTGAAAAAGTCTACGAGGTTTATGGTTATGGAGGAGTTAGTATTGTAGTTGAGGTATCAACTGATAAGGTACATCGATCTGTGGCAAAGATTAGAGAAGTGATAAGGGACTATGGAGGAAAGATGGCAGATTCTGGATCTGTGATGTTTAAGTTTAGACGTGTTCGCGTAGTAAATATTAAAGTCACCAATGCTGACAAAGATCAGCTGCTTGACATTGCTTTAGATGCTGGAGCTGAGGATGTAATTGAACCTCCAACTTATGAAGATGACACTGAAGAGGATAGGTCAGAAAGGTATTATAAAATTGTGGGTTCTTCGGAGAACTATTCATCAATACTATCCAAGCTGCGAGAGGAGGGCATAGATTTTGAGCCTGATAATGGTTCTGAGCTTCTTCCAAATACCACGGTTGAGGTGGACGATGAGGCCATGGACTTGAACAAGGAACTTATGAGCAAATTACTTGAGCTTGATGACGTTGATGCTGTTTATACAGATCAGAAATAG 894 0.4228 MRALLQLQALTSRVSLSSSTFVRGKSLWFDANANANRAHRRIWTSTPLCMGRRSSKIAGRKEAQDAKKAKLYSRIGKEVVSAVKKGGPNVTSNSVLAALLEKAKELDVPKDIVERNIKRATEKGQEAYIEKVYEVYGYGGVSIVVEVSTDKVHRSVAKIREVIRDYGGKMADSGSVMFKFRRVRVVNIKVTNADKDQLLDIALDAGAEDVIEPPTYEDDTEEDRSERYYKIVGSSENYSSILSKLREEGIDFEPDNGSELLPNTTVEVDDEAMDLNKELMSKLLELDDVDAVYTDQK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01404 297 Hamap Probable transcriptional regulatory protein YebC [yebC]. 50 297 IPR002876 -
Cca03g01404 297 Gene3D - 179 264 IPR026564 -
Cca03g01404 297 PANTHER UNCHARACTERIZED 12 297 IPR002876 -
Cca03g01404 297 SUPERFAMILY YebC-like 50 296 IPR029072 -
Cca03g01404 297 Gene3D - 131 294 IPR026564 -
Cca03g01404 297 Gene3D - 65 126 IPR017856 -
Cca03g01404 297 Pfam Transcriptional regulator 54 295 IPR002876 -
Cca03g01404 297 PANTHER TRANSLATIONAL ACTIVATOR OF CYTOCHROME C OXIDASE 1 12 297 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01404 - - gmx:100795367 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01404 03 32350816 32356257 Cca03g01404 03 32350816 32356257 ECH