Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01394 ATGGAGCAGAACCAGCAGAAGCTTCGAAAGGCTGTCTCGGACGTGTCAAAGGAAATTGGAAAATACTATAAGTATGAGTTTGAGTTGGTGGAGAGAGAACTTGGTGCTATTGAAGAGGTGGAACAAGCTGAATGCCAATGTTGTGGGTTGAAGGAGGAGTGCACCACAGTTTATATCACAAAGGTTCAAGAATGTTACTGTGGGAAGTGGGTTTGTGGGCTTTGTTCTGAAGCTGTTAAAGAAAGAGTAGGGCGAAGTCCTAAAGTGGCCATGCAAGATGCTTTGAACTCTCACAGGGATTTCTGCCAGGAATATAACGCCACCACTAGACTTAACCCTCAACTCTCGTTGACTCAGTCTATGAGGGGAATAGCTAGAAGAAGTTCAGAGAATAGAAAATCTAAGGGGTTAAGCATATCAAAGCTTAGTAGGACCATTAGTTACCCCTAA 450 0.4356 MEQNQQKLRKAVSDVSKEIGKYYKYEFELVERELGAIEEVEQAECQCCGLKEECTTVYITKVQECYCGKWVCGLCSEAVKERVGRSPKVAMQDALNSHRDFCQEYNATTRLNPQLSLTQSMRGIARRSSENRKSKGLSISKLSRTISYP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01394 149 PANTHER OS01G0745000 PROTEIN 2 148 IPR012876 -
Cca03g01394 149 PANTHER OS01G0745000 PROTEIN 2 148 - -
Cca03g01394 149 Pfam Protein of unknown function (DUF1677) 40 127 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01394 Cca-Chr3 32209032 32209582 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01394 - - gmx:100776718 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01394 03 32209032 32209582 Cca03g01394 03 32209032 32209582 ECH