Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01393 ATGCCCCCAAACCATCCCTTTAACTCCTCCACCACCAACATCAACATGGCCGTTTCCGATATAACCTTTGAAGAAGAAGTGGCCCTAGAAGAAACACGTAATGATGAGTCACCATTAGCAACGGTGTCCGAGGTAGACAGTGCCAAATGCGAGTGTTGTGGAATGTGTGAAGAGTGCACCCTCGAGTACATAAGGCGCGTGCGTGACATGTTCTCAGGGAGGCTAATATGCGGGTTGTGTGCTGAAGCTGTGAATGTGGAGATGGAGAAGAACGGTGGAAAGCGTGAGGAAGCGTTGAAAGAGCATATGAGCGATTGTTTCAAGTTCAATTGGCTTGGTAGGTCATACCCTCATTTGTATCAAGCTGAAAACGTCAAGAAGATATTGAAGAAGAATATTGCTTCAAGAAACAGGGACATGTCCAAAACACTATAA 435 0.4575 MPPNHPFNSSTTNINMAVSDITFEEEVALEETRNDESPLATVSEVDSAKCECCGMCEECTLEYIRRVRDMFSGRLICGLCAEAVNVEMEKNGGKREEALKEHMSDCFKFNWLGRSYPHLYQAENVKKILKKNIASRNRDMSKTL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01393 144 PANTHER OS01G0745000 PROTEIN 1 134 IPR012876 -
Cca03g01393 144 PANTHER - 1 134 - -
Cca03g01393 144 Pfam Protein of unknown function (DUF1677) 45 131 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01393 Cca-Chr3 32203525 32203959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01393 - - gmx:100778170 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01393 03 32203525 32203959 Cca03g01393 03 32203525 32203959 ECH