Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01392 ATGTCTTCCGAAACGGGGATGGAGCCTCTCACGTCGGGGGCAAGCAACCGCATAATTCCGCTTATGAAGGCTCTGCGGGCCTCGTTGATCTTCGTCTACACGTTTTTCCTCTCCTTTCTCTTTTTCGTTCTCCCGCGCCGCCGCCGCCTCTCCTCCACGGCGGGGCCGCCATCCTCGCCCAAGAAGCACTTGAGGCGCCGCTGGCTCGTGCGAGAGGAGGAGGACACGTGCCGGAGAAGAGCGCTCGCGCAGGACGTGGGAATGGGTCGCGACGAAGGGTGGTGCCGTTGCAGCACTTCTATCTTCTACGGCGTTAGAAATAACGGCTTGTTTTGCCGCTCTTGGTTCCCCGTCTATGGTGATGTTAAGGGTATTCTGATCATCATTCACGGGCTTAATGAACACAGTGGCAGATATGCAGAATTTGCAAGGCAATTAACCTCATGCAACTTTGGTGTCTATGCGATGGACTGGATTGGTCATGGTGGTAGTGATGGATTACATGGTTATGTTCCTTCTCTTGATCATGTGGTTGCAGACACAGGTGCTTTCCTGGAAAAGATTAGATCAGATAATCCTGGGATTCCATGCTTTCTCTTTGGTCACTCCACTGGTGGGGCTGTGGTCTTGAAAGCGGCTTCTCATCCTCATATTGAAGTAATGGTGGAAGGAATTATACTAACCTCGCCAGCTTTACGTGTGAAGCCAGCTCATCCAATTGTTGGTGTAAGTTTTGCAATTGTAGGTTGTGCATGA 756 0.5159 MSSETGMEPLTSGASNRIIPLMKALRASLIFVYTFFLSFLFFVLPRRRRLSSTAGPPSSPKKHLRRRWLVREEEDTCRRRALAQDVGMGRDEGWCRCSTSIFYGVRNNGLFCRSWFPVYGDVKGILIIIHGLNEHSGRYAEFARQLTSCNFGVYAMDWIGHGGSDGLHGYVPSLDHVVADTGAFLEKIRSDNPGIPCFLFGHSTGGAVVLKAASHPHIEVMVEGIILTSPALRVKPAHPIVGVSFAIVGCA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01392 251 Gene3D alpha/beta hydrolase 98 247 IPR029058 -
Cca03g01392 251 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 60 244 - -
Cca03g01392 251 SUPERFAMILY alpha/beta-Hydrolases 103 234 IPR029058 -
Cca03g01392 251 PANTHER PHOSPHOLIPASE-RELATED 60 244 - -
Cca03g01392 251 Pfam Serine aminopeptidase, S33 121 240 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01392 Cca-Chr3 32176017 32180407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01392 2 243 Acyl Lipid Metabolism Gene Families AT5G11650 62.151 1.43e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01392 - K01054 gmx:100816265 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01392 03 32176017 32180407 Cca03g01392 03 32176017 32180407 ECH