Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01391 ATGGGTGGGTCTGAGGAATCGAAGTCAAGATGGGAAGGTGAAACTTCAATTGAAGTAGAAGGCATGAGTGCAGAACAAGTGTGGCCTCTGTTGGAAGACTTCTGTAGCATACACAAGTGGCTCCCAATAGAAACTTGTTTCCAAGTAGAGGGGACTTATGGGCAACCTGGTCTCATCCGATACTGTGCCATGAACATGAACACAGCAGATGATGAGCCAACATTGATGTGGGCCAAAGAGAAGCTACTCCACATAGATCCTATCCAACGCTCTTTGATATACGAGGTTGTGGACAGCAACATGGGATTCAATTCATATGTCGCCACTATCCAAGTATTCCCCGTACCTAAACCTACAACTTGTGAAGCTAGTAGTTGGGAGAATTGGGCCAAACCACGAATCACTCTGAACCAGCAAGCTTGCTCAGTTCTCGTTTTGTCCCTCCTCTTGTTTCATCCATTTTTTTTGTTATTGCTGTTGGGATCATTTTTATTTGTTCCAAAAGTCAACTTTGCTTGGTCAGTATTTTTACCAGAACCTGAGCCATAA 549 0.439 MGGSEESKSRWEGETSIEVEGMSAEQVWPLLEDFCSIHKWLPIETCFQVEGTYGQPGLIRYCAMNMNTADDEPTLMWAKEKLLHIDPIQRSLIYEVVDSNMGFNSYVATIQVFPVPKPTTCEASSWENWAKPRITLNQQACSVLVLSLLLFHPFFLLLLLGSFLFVPKVNFAWSVFLPEPEP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01391 182 CDD PYR_PYL_RCAR_like 11 120 - -
Cca03g01391 182 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 7 125 - -
Cca03g01391 182 PANTHER - 7 125 - -
Cca03g01391 182 Gene3D - 4 144 IPR023393 -
Cca03g01391 182 SUPERFAMILY Bet v1-like 22 121 - -
Cca03g01391 182 Pfam Polyketide cyclase / dehydrase and lipid transport 12 126 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01391 Cca-Chr3 32172470 32173688 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01391 - - ccaj:109818048 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01391 03 32172470 32173688 Cca03g01391 03 32172470 32173688 ECH