Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01381 ATGGAGACTGAAGCCGCTAACAAGACTCTTCCAGTAAGAGATCCAGCTACCGAACTCGATGATGATGGCAGAGCCAAAAGAACCGGGAACGTGTTCACGGCCACAACGCACATAATAACGGTGGTGGTAGGAGCAGGAGTGCTGGCCCTGGCATGGGCCATGGCTCAGCTTGGATGGATAGCTGGCCTTGCTGTTATGATCATTTTTGCATCCATTTCCATGTACACTTACAATCTCATTGCTGATTGCTACAGATATCCTGACCCTGTCAGTGGCAAGAGGAACTACACTTACATGCAAGCCGTCAATGTATACCTTGGTGGAACTATGCACGTGTTTTGCGGAGCGGTCCTATATGGGAAGCTCGCTGGGGTTACAATTGGCTACACTATAACTAGTTCAATAAGCTTGGTGGCTATAAAGAAAGCCATTTGCTTCCACCAAAAAGGTCATGATGCTTATTGCAAGTTTTCAAATAACCCCTACATGATCGGGTTTGGGATTGGGCAAGTTTTACTGTCTCAAATCCCAAATTTCCATAAGTTAACGTGGCTTTCAACCATTGCTGCCGCTACCTCTTTCGGTTATGCTTTCATTGGAAGTGGGCTTTCTCTAGCAACAGTGATCGCAGGTAAAGGACAACCAACCAGTCTATATGGAAACAAAATAGGGCCTGACCTATCTGAATCAGATAAAGTTTGGAAGGTTTTCAGTGCTTTGGGAAACATTGCGCTTGCTTCCTCTTTTGCTACTGTTATTTATGATATAATGGACACATTGAAGTCATATCCACCAGAATGCAAACAGATGAAAAAGGCGAATGTGTTAGGAATCACGTTAATGACAATACTTTTTCTACTATGTGGTGGCCTTGGCTATGCTGCTTTTGGACATAACACACCGGGGAATATCCTCACTGGCTTTGGATTTTACGAGCCATTCTGGTTGGTGGCCCTTGGGAATGTTTTCATTGTAGTCCACATGGTGGGAGCATATCAGGTGATGGCTCAACCATTATTTCGTGTAATTGAGATGGGTGCAAACATGGCGTGGCCGCGTTCAGATTTCATAAACAAGGGATACCCACTAAAAATTGGGTCCTTAACATGTAACATCAACTTTTTTAGGCTAATTTGGAGGACAATATATGTGGTAGTGGCCACAGTTATTGCCATGGCGATGCCATTTTTCAACGAGTTTCTTGCCTTGCTTGGAGCTGTTGGGTTTTGGCCACTCATTGTCTTCTTCCCTGTACAAATGCACATTGAACAGAAACAGATTAAGAAAACGTCATTGAAGTGGTTTGTGCTCCAAATATTGAGTTTCGCGTGCTTCCTAGTTACAGTTACCGCTGCAGTTGGATCCGTTCGTGGAATTAGCAAGAATATCAACAAGTACAAAATTTTCATGTATAAACAATAG 1422 0.4353 METEAANKTLPVRDPATELDDDGRAKRTGNVFTATTHIITVVVGAGVLALAWAMAQLGWIAGLAVMIIFASISMYTYNLIADCYRYPDPVSGKRNYTYMQAVNVYLGGTMHVFCGAVLYGKLAGVTIGYTITSSISLVAIKKAICFHQKGHDAYCKFSNNPYMIGFGIGQVLLSQIPNFHKLTWLSTIAAATSFGYAFIGSGLSLATVIAGKGQPTSLYGNKIGPDLSESDKVWKVFSALGNIALASSFATVIYDIMDTLKSYPPECKQMKKANVLGITLMTILFLLCGGLGYAAFGHNTPGNILTGFGFYEPFWLVALGNVFIVVHMVGAYQVMAQPLFRVIEMGANMAWPRSDFINKGYPLKIGSLTCNINFFRLIWRTIYVVVATVIAMAMPFFNEFLALLGAVGFWPLIVFFPVQMHIEQKQIKKTSLKWFVLQILSFACFLVTVTAAVGSVRGISKNINKYKIFMYKQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01381 473 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 468 - -
Cca03g01381 473 MobiDBLite consensus disorder prediction 1 22 - -
Cca03g01381 473 Pfam Transmembrane amino acid transporter protein 28 458 IPR013057 -
Cca03g01381 473 PANTHER OS05G0424000 PROTEIN-RELATED 3 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01381 Cca-Chr3 32022900 32029175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g01381 18 469 Organic Solute Cotransporters AT1G10010 54.967 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01381 K24917 - gmx:100780988 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01381 03 32022900 32029175 Cca03g01381 03 32022900 32029175 ECH