Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01376 ATGTTCTCAATTGCAGCTATCAATGACACTGACTCCAAAAGTCAGTGGGAACCACTAGCCCCCACGAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTACCATGAAGGGCTTCTCAAGTTACAAACAAAAGAATACGAGAAGGCTCGCGAGCTCTTAGAATCTGTCCTTAAAGACCCTCTTATTGCTAATGCTCAGGTGGATAGCAGTGCCAGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCTGCTGTTTTTCTTCAGCAAGGCTCTACATATTATGAGAATGCTCTACGATGTTATCTTCAAGCTGTGGAAATCGATTCTAAAGACTCTGTTGTCTGGAACCGGCTGGGAACTTTGTCGTGCTCAATGGGCTCGTTGAGTATTTCACGTTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCTAATAATTGGAATTGCATGGAGAAGCTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTTTCTGTCGCTGAGTTGATTTTGAGGCACTGGCCATCACATTCTCGTGCTTTGCATGTTAGAAATACCATCGAAGATTCAGAGCCTTTGCCATTTGCTCCAAGAGGCATAGACAAATTGGAACCTAAACATGTGCGGCTCAAATTTCCTGACAAGAGAAAAGCTACAAATGAGAATGTAGGTGAGGATGTTGCATTCAAAAAGCTGAACCGGAATAAAGAACTGCATCTGACAGAAGTTTCCTGGGTGGCTTTTGCTGATGCACTTATAAAAATCTTATCACCAGAAAGTTCTGAGATGGATCCTGAAAAAACATGTAGTTCTCCTGATATTAGGCTAAGCATAATTTTACCTTGTAGCTCAGAAGCTGTTATGAACACCGTGGAAATGAAAGGGTCCAATGTTGAAAATAGTGTTTTTGGTGATGGTAACATAGATCGATCAAGTGCTTTTAAAGAGAAAGAAGCAATTATACAAGAAGAACAACCACATGAAAGGCGAAGTTCTCGACTTGAAAGGCTACGGAGTCGCAAACCAGGAAAAGAAGAATCTGATTCTTCTTATGGCAAGGACCCTGCCAAGGTTGTCATTCAGTATCTAGAGCCATTTATTGCTGGTGAATTGGGGGGTCAAGATACAATTGATAGAGATACCTCGGCACTATCCAGTTTAGGAAATTCTGAATATCATAATGTTTCTGCATTTTTAAGAGAAACTTCAAGCAATTATGGTGCTTATCATATGGGGCACTTGCTTTTAGAAGAGGTTGCAAGACAAGGTCTCAAATATCAGGATGCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTGACAAGGCATTGGGGGAAGGAGAGAACTGCTGAATGCAATATTTTTCTTGCTGAGCTGCATTATGACTTTGGATCATGCTCCTCCTCCAGTTCTAAACAGTTAGAATTTATTTCTGAGACATCTTATCATCTTTGTAAGATCATTGAATCAGTAGCTTTAGATTATCCTTTGCACTTGACTCATGCCTTGAATGAAGGTTGTTCTTTGATAGATAGTGTCCAAGAGACCAGTGGAAAAACAATAAATACCTCCACTGAGAGAAATTCAAATATAGACAACTCACTTCTGATGAAAAATAGTTCCCTCTGGGCTCGATTCTTCTGGCTAAGTGGGAGATTGTCTATTGTTGATGGCAACAGGGCAAAAGCTTGTGAAGAGTTTTGTATTGCTTTGTCACTTTTGGGAAAGAGAGAAAATATGGAAGATTCTCTATGTTCGGTCCCCCGCCCACATTGCAAGGCTGTAAAAGAGCTAAATTTTGATAGAGTTCTTGATGAAATTAATATATTAAAGGTCAATTTCTTGATGGAAAAATCTGTCATTAAGATGATGGAACAAGAGAAGTTTTTGGAGTGTGTATCCCTCCTTTCTCCACTTCTGTTATCCACACATGATGTCTACCCTGATTCATTCTCTTTGTCCATGACAGATAAAAAAGATGAAAAGACAACTTCCACTGAACTCATGGCTGTAGATGTTCTAATAGAAGCATGTCAAAAGACAAGACCAATGAATGTAGAGATGTATTTCAATTGTCATTACAGAAAGCTGAAAATACTTATGGGAATGATGGGTTTGAGTACATGTATTACATCATTTAAATCTTCTGATCATGCACCTGGTTTAAGTGCATCTCCTAATTTTGATATTGATTCAAAGGAAAGTTCTAGCAAGCACTGTAGTCACTTGGTTGTGGAGGAAGTGAAGGCACTCTCTGACTGCATCTCACAAGTCAAAAAGGTTATTGACCATCATGGAGATTCTGTAAGCAATGCCATTCTGGTAGTCTTGGAGTCTAAGGATAGCCTTAACGTTCCAACAAGCAGCATTTGTCAAATGCAGTCTCTGCTATTGTTAATCATGAGTTATGTTGCGAACATACTTGTCTGCAACAATGCCTCAGCACAATTAATTTCTGATCAAGTTGAAAGCAGCTGTTTTATTGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTTATCCCGACTACACCTATCAAAACCCAAGTTGATTTAATTGTTGCAACACATGACTTGCTTGCTGAATATGGGCTTTGCTGTGTGGGGGGAGGTGGCAAAGGTGAAGAAGGAACATTTCTTAGATTTGCGATAAAGCATCTCTTGGCCTTGGATATGAAGCTTAAATCCAGCTCTAACCATAAAGAGTCAATGCGATCTGAAGAAGTGTCCAAAAACAGTATTGTCAATGTGTCTGTTGAAGAATCAAAATCAGATACATTAGACATCCAGATGGATTGGACCAAAATTGATGAAATTAATTCACTTAAAAAGGATGTTTCTGAAGGAATAATATCCAAAGGCATTTCATCTTATAGAGTTCATGATAAAGACAGTAAGGAAGTAGAGTGTGAAACTCATGGAGGTGCTGTCACTGATAGTAAGTTCATTGAAGGTGGAAATGAACTATCTGAAGATGAATGGGAGGAACTTGAGTCTAAAATTGATTGTGCCTTAGATCAGTGCTTTTTCTGCTTATATGGATTACATCTAAGATCTGATTCATCTTATGAGGATGATCTAGTGATGCACAAAAACACAAGCCGAGGAGATTATCAAACTAAGGAACAATGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGTCATCTTCTAGAACTGGACTGGTCAAACTTCGTAGAGTTTTAAGGGCTATTAGGAAGCACTTTCTGCAACCACCAGAGGATCTCTTGCCAGGAAACCCTATAGATAAGTTCCTAGATGATCCTAATCTATGTGAAGATAAACTCTCAGAGGAGGCTGGGTCTGATGAATTTTTCAAATCTATTACTAAGATCATGTTTCCTGATGTGGGTGGCCTTGCTCAGTTTAATGCAACATTATTGAGGAGGTCTGAGCCATATTTGGAGGTCTACTGTAACTTGTATTATTTCTCGGCTCTGTCTGAAGAGATGAGTGCAACAGATAAGTGGCCTGGATTTGTGCTAACCAAGGAAGGGGAAGAATTTGTTGAACAAAATGCGAAGCTCTTCAAATATGATCTCATGTACAATCCTCTGCGCTTTGAAAGCTGGCAGAGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTGCTAAATGATGGCAGCAAGCACGTTAATGTAGTAGGGTGGAGGAAGAATGCTACTTTATCTGAGAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGCCTACTAATGAGTTTAGCGCTGGCAAAGACATCTGCTCAGCAGTGTGAGATACATGAGTTATTGGCATTGGTGTACTACGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGTTTTGCCCTTAAAGGATGCGGCGTGGATGATGTTTTGTGAGAACTCAATGAAACATTTTAAGAAAGCCTTCACACTTAAGCAAGATTGGTTGCATGCCTTTTACTTGGGTAAACTCAGTGAAAAACTTGGATATTCACTTGAAATTGCATTATCATATTACAATAAAGCTATTGCTTTGAACACATGTGCTGTTGATCCAGTCTATAGGATGCATGCCTCACGCTTGAAATTATTATTTAAGTGTGGAAAGCAGAATTTGGAGATTTTGAAGGTTCTCTCAGCAAACTCCTTTAATCAATCTGTAAATGAAGCTGTCACAAGTATCCTTGGTGGTATAGATAGTTCATATTTAGATATAAAGGAGAGAGGTATTCATGCCAATTTTGTTGAAACAAAGCATGAAGAGTTGCTCAAATTGGATACAGTATGGTCTATGCTTTACAATGATTGCCTTTCTGCTCTTGAAACTTGTGTTGAGGGTGATCTCAAACATTTTCATAAGGCCAGATACATGCTGGCTCAAGGGCTGTACAAAAGAGGTGAGAGTGGTGATATAGAGAGGGCAAAAGATCATCTATCTTTCTGCTTCAAATCTTCACGCTCATCATTTACAATAAATATGTGGGAAATTGATAGCATGGTAAAAAAAGGAAGGCGCAAGACACCAGGTTCTGCTGGGATCAAAAAAGCCCTTGAGGTTAACTTGCCAGAAAGTTCTCGAAAATTTATTACATGCATACGAAAGTATTTGCTGTTTTATCTCAAACTATTGGAGGAGACTGGAGATAGATGTATTCTTGAACGTTCGTATGTTTCTCTTCGGGCAGATAAACGGTTTTCATTATGCATTGAAGATCTTATACCGGTGGCTATCGGAAGGTATCTAAAGGTCCTGATATCAACTATGTGCCATTCTCAGACTGCTGCCTCTAATTCAATGAGCAGTTCTGACAATGTGCTGGAGAGAATGTTTACATTGTTCATGGAGCAAGGGAGCTTATGGCCAGAAATATGCAGCTTGCCTGAAATTGAAAGCCCAGACATGTCAGAGAATATGATATATGGTTATCTTCATGAATATATTGTATTATTGGAGAAAAATGGAAAACTGGAAACTCTTGAAGCAATAAATGAGAAGATACGGAAGCGTTCTAAGAATCCGAAGTTCTCAGATAGTAATTGTGCAAAAGTTGGCAGGCATGCTTCTGCTGCTTGGTGCCGATCTCTTGTATACAATTTGGCACAAATAACTCCGTTATCATGCGGATTCTCAAATGGGATTCAGCTCCTTAATTTGACTGATGGTGGGATAGATAATAGCCAGTTGCTCTGTATTGATTTGCAGCCAAATGAATTATGGAGTACAGCTTTTGAAGATCCAACTCATTTGGAAAAGATTGAAACAAAATGGAGCCCCGTGTTAGAAAAAATAAAAAATATAATAATCAAGAAAGCTTCTGATGAGAATTTGGAAACTGCAAACACTTTGCTCAGAGCTTGCTACAATTTTTACCGGGAGAGTTCTTCTGTTATGCTTACCTCTGGACTCAACTTTTATTTGATTCAATCTCAATTAGTAACACAGACACCATTCAACCCAAATACAGCTGGGACTGAAGCACTTGAGCTGAGCATACCAAGGAAGCTTCTCTTGTGGGCCTATGTACTATCGCATGGACGTTGTGCAAATATCTCAATTGTTGTAAAGCATTGTGAAGAAATTTCAAAGTCAAAGATGAAAAGAGGAAGTGGAGCATCACCTGGGTTATCAAACACGTCTCCTGCCCCTAGTCTTATAGGTAGCGGTAAAAACGGACCAAATTCTGCTGGAGGCATTGACGTTGATTCTACCCATGTCACAACAGTGGGGTGTGGTTCATTTTCTAGCAGCGGCAATACCTCTAATCTTGTGAATTCACTTCCCTCCGATGACATTCAAAAGAATCTCTTTGCTTCTCCCCAGTTGCATCAATGCACCACTAACGATGCAGAAAGAAGCAATTTGATGGCACATGAAAGAGATACTACAGAAGGAGATTGA 5919 0.3942 MFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQTKEYEKARELLESVLKDPLIANAQVDSSASDGHLLQLRFLALKNLAAVFLQQGSTYYENALRCYLQAVEIDSKDSVVWNRLGTLSCSMGSLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVRNTIEDSEPLPFAPRGIDKLEPKHVRLKFPDKRKATNENVGEDVAFKKLNRNKELHLTEVSWVAFADALIKILSPESSEMDPEKTCSSPDIRLSIILPCSSEAVMNTVEMKGSNVENSVFGDGNIDRSSAFKEKEAIIQEEQPHERRSSRLERLRSRKPGKEESDSSYGKDPAKVVIQYLEPFIAGELGGQDTIDRDTSALSSLGNSEYHNVSAFLRETSSNYGAYHMGHLLLEEVARQGLKYQDAFVKFLELEKLTRHWGKERTAECNIFLAELHYDFGSCSSSSSKQLEFISETSYHLCKIIESVALDYPLHLTHALNEGCSLIDSVQETSGKTINTSTERNSNIDNSLLMKNSSLWARFFWLSGRLSIVDGNRAKACEEFCIALSLLGKRENMEDSLCSVPRPHCKAVKELNFDRVLDEINILKVNFLMEKSVIKMMEQEKFLECVSLLSPLLLSTHDVYPDSFSLSMTDKKDEKTTSTELMAVDVLIEACQKTRPMNVEMYFNCHYRKLKILMGMMGLSTCITSFKSSDHAPGLSASPNFDIDSKESSSKHCSHLVVEEVKALSDCISQVKKVIDHHGDSVSNAILVVLESKDSLNVPTSSICQMQSLLLLIMSYVANILVCNNASAQLISDQVESSCFIDAAIVFCKLQHLIPTTPIKTQVDLIVATHDLLAEYGLCCVGGGGKGEEGTFLRFAIKHLLALDMKLKSSSNHKESMRSEEVSKNSIVNVSVEESKSDTLDIQMDWTKIDEINSLKKDVSEGIISKGISSYRVHDKDSKEVECETHGGAVTDSKFIEGGNELSEDEWEELESKIDCALDQCFFCLYGLHLRSDSSYEDDLVMHKNTSRGDYQTKEQCADVFKYVLPYAKSSSRTGLVKLRRVLRAIRKHFLQPPEDLLPGNPIDKFLDDPNLCEDKLSEEAGSDEFFKSITKIMFPDVGGLAQFNATLLRRSEPYLEVYCNLYYFSALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHVNVVGWRKNATLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQNVVPFYDQRSVLPLKDAAWMMFCENSMKHFKKAFTLKQDWLHAFYLGKLSEKLGYSLEIALSYYNKAIALNTCAVDPVYRMHASRLKLLFKCGKQNLEILKVLSANSFNQSVNEAVTSILGGIDSSYLDIKERGIHANFVETKHEELLKLDTVWSMLYNDCLSALETCVEGDLKHFHKARYMLAQGLYKRGESGDIERAKDHLSFCFKSSRSSFTINMWEIDSMVKKGRRKTPGSAGIKKALEVNLPESSRKFITCIRKYLLFYLKLLEETGDRCILERSYVSLRADKRFSLCIEDLIPVAIGRYLKVLISTMCHSQTAASNSMSSSDNVLERMFTLFMEQGSLWPEICSLPEIESPDMSENMIYGYLHEYIVLLEKNGKLETLEAINEKIRKRSKNPKFSDSNCAKVGRHASAAWCRSLVYNLAQITPLSCGFSNGIQLLNLTDGGIDNSQLLCIDLQPNELWSTAFEDPTHLEKIETKWSPVLEKIKNIIIKKASDENLETANTLLRACYNFYRESSSVMLTSGLNFYLIQSQLVTQTPFNPNTAGTEALELSIPRKLLLWAYVLSHGRCANISIVVKHCEEISKSKMKRGSGASPGLSNTSPAPSLIGSGKNGPNSAGGIDVDSTHVTTVGCGSFSSSGNTSNLVNSLPSDDIQKNLFASPQLHQCTTNDAERSNLMAHERDTTEGD 1972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01376 1972 MobiDBLite consensus disorder prediction 1953 1972 - -
Cca03g01376 1972 Coils Coil 39 59 - -
Cca03g01376 1972 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Cca03g01376 1972 MobiDBLite consensus disorder prediction 1877 1907 - -
Cca03g01376 1972 Coils Coil 1656 1676 - -
Cca03g01376 1972 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1951 IPR033053 -
Cca03g01376 1972 MobiDBLite consensus disorder prediction 326 359 - -
Cca03g01376 1972 Coils Coil 993 1013 - -
Cca03g01376 1972 Gene3D Tetratricopeptide repeat domain 6 193 IPR011990 GO:0005515
Cca03g01376 1972 MobiDBLite consensus disorder prediction 1872 1907 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01376 K17613 - gmx:100783154 3410.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01376 03 31950119 31963718 Cca03g01376 03 31950119 31963718 ECH