Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01373 ATGGCCTTAACTCGAGTGTGTGTCTCCTGCCACAAATATAGACAAACCATTCTATGCCTCATTCTCTTTGCTATTGCTATTGCTTTCACACCCCAAGGAAGAGCAATTTCCAGTTTTATAGAAGTTGCCCAGAAGGACTTGAGAGAGAGGGAATCAATCACGGTGGTGTCAAAACCTCAGATAGGGTCTAGGCCTCCAAGGTGTGAAAAAAGATGCAGCACTTGTGAACACTGTGAAGCAGTTCAAGTCCCGGTTGCGTCTCAAATTCAAAGCCATACAAGACATTATTATTCACCAGCAAAAGCTTCCACAGTTGTTACTAACTCAAGAAGTGATGACCTTTCCAATTACAAACCAATGAGTTGGAAATGCAAGTGTGGAGACTTGCTTTTCAATCCTTGA 402 0.4254 MALTRVCVSCHKYRQTILCLILFAIAIAFTPQGRAISSFIEVAQKDLRERESITVVSKPQIGSRPPRCEKRCSTCEHCEAVQVPVASQIQSHTRHYYSPAKASTVVTNSRSDDLSNYKPMSWKCKCGDLLFNP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01373 133 Pfam Epidermal patterning factor proteins 60 133 - -
Cca03g01373 133 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 1 133 - -
Cca03g01373 133 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 1 133 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01373 Cca-Chr3 31912961 31913732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01373 - - gmx:100804735 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01373 03 31912961 31913732 Cca03g01373 03 31912961 31913732 ECH