Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01370 ATGGATCCTTGCCCTTTCGTCAGGCTCACCGTTGGCAACCTCGCCCTCAAGATTCCCGTCGCCTCCAAACCCGCGCGCTCCGTCGTCCACCCTTCCTCCTCCCCCTGCTTCTGCAAAATCAAGCTCAAGAACTTCCCACTCCAATCCGCCCTCGTTCCCTTCATCCCTCCCGACACCCACTCCCCGGACTCCCAGGTCCAACCCATCGCCGCCTCCTTCCACCTCAGCAAGTCCGATCTCGACAAGCTCGCCGCCAAATCCATCTTCGCCGGCAAGCTCTGCCTCAAAATCTCCATCTACACCGGCCGCCGCGGCACCACCTGCGGCGTCAACTCCGGCAGACTCCTCGCCAAAGTCTCCGTCCCCTTGGATCTCGCCGGAACGCTAGCCAAGGCCACCGTCTTCCACAATGGCTGGATTACCGTCGGAAAAGACGCCAAAGGCTCCTCCGCACAGTTCCATTTGAATGTCAAAGCCGAACCCGATCCTAGATTCGTCTTCCAGTTCGACGGCGAACCGGAATGCAGCCCCCAGGTTTTCCAGATCCAAGGCAACATTTCTCAACCCGTCTTCACCTGCAAATTCAGTTTCAGAAACACCGGCGACCGAAATCACCGTTCCAGGTCGTTACAATCTGAGCAAGGCGGTACTAGGAGTTGGTTAAGTTCGTTCGGGAGCGAGCGGGAGCGTCCGGGGAAGGAGCGCAAGGGGTGGTCCATAACGGTTCACGACCTTTCCGGTTCGCCGGTGGCCGCGGCTTCCATGGTCACGCCCTTCGTCGCTTCTCCCGGTTCGGACCGGCTGATACCGGACACCAACGGCGGCATGAGCGCCGGCGGCATAGTCCTGGCGGAGTCCACGCTGAGCTCGAACAAGGGAGGGAAGTTCGTGATCGACATGAGCTGCCGCGGCGGGTCGAACGGGCGCGCGACGCCGGGGAGCGCGACATCGCCGGCGTGCAGCCCGAGGAGCAGCGGGGACTACGGGTACGGGCTTTGGCCGTATTGTATGTACAGAGGGTTTGTGATGTCGGCGAGCGTGGAGGGTGAGGGGAGGTGCAGCAAGCCTACGGTGGAGGTGAGTGTGCCGCACGTGAACTGCACGGAGGATGCGGCGGCGTTTGTGGCGTTGGCTGCTGCCGTTGATCTGAGCGTGGATGCTTGCAGGCTGTTCTCTCAGCGGCTGAGGAAGGAGCTCTGCCAGCAGCTGGACTTGGTTGGCTGA 1224 0.616 MDPCPFVRLTVGNLALKIPVASKPARSVVHPSSSPCFCKIKLKNFPLQSALVPFIPPDTHSPDSQVQPIAASFHLSKSDLDKLAAKSIFAGKLCLKISIYTGRRGTTCGVNSGRLLAKVSVPLDLAGTLAKATVFHNGWITVGKDAKGSSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNTGDRNHRSRSLQSEQGGTRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRLIPDTNGGMSAGGIVLAESTLSSNKGGKFVIDMSCRGGSNGRATPGSATSPACSPRSSGDYGYGLWPYCMYRGFVMSASVEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQLDLVG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01370 407 Pfam Protein of unknown function (DUF1005) 1 268 IPR010410 -
Cca03g01370 407 Pfam Protein of unknown function (DUF1005) 274 400 IPR010410 -
Cca03g01370 407 PANTHER OS07G0133500 PROTEIN 1 267 - -
Cca03g01370 407 MobiDBLite consensus disorder prediction 210 224 - -
Cca03g01370 407 PANTHER OS08G0163500 PROTEIN 1 267 IPR010410 -
Cca03g01370 407 PANTHER OS08G0163500 PROTEIN 268 403 IPR010410 -
Cca03g01370 407 MobiDBLite consensus disorder prediction 201 236 - -
Cca03g01370 407 PANTHER OS07G0133500 PROTEIN 268 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01370 Cca-Chr3 31881807 31883722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01370 - - gmx:100805268 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01370 03 31881807 31883722 Cca03g01370 03 31881807 31883722 ECH