Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01368 ATGAGGTTGAGGGAGGACGTGCCTTGTAAAAACGATGACGTTAGTGCCGAGAAAGAGGAACTCATAGAGAAGGATTTAACCTTGCCACAAAATCAATGGTGTCCCGTGCTGAATGCGGGCTTTTCTTCCCCTAAGAGACTCGTTGTCGTTGGCTATGCTCTCACTACTAAAAAGATTAAGAGCTTTTTGCAGCCTAAGCTCGAAGGTTTAGCTAGGAACAAGGGAATTCTATTCGTGGCTGTTGATCATAATAGGCCTCTTTCAGATCAAGGTCCTTTTGATATTGTGTTGCATAAGGTTATAATTTTCCCTGCGCTGAACTTCCTCGATTATAGGCAGTCACATCCAGAAGTTACTGTTCTAGATCCTCCAGATGCCATACAACATTTGCGCAATCGTCAGTACATGCTTCAGGCTGTTGCAGATATGAACCTTTCTGATTCCTATGGCATAGTCGGTGTTCCTCGTCAATTAGTTATCAAGAGAGATGCATTAGCCATCCCAGAGTTGGTCAACAAAGCTGGCTTGACTTTACCCCTTGTTGCAAAGCCACTAGTTGCTGATGGAAGTGCAAAATCCCATGAGTTATCCCTTGCTTATGAGAAATACTCCCTTCAAAACCTTGAACCTCCACTTGTTCTTCAGGAGTTTGTTAACCATGGAGGTGTTCTCTTCAAGGTTTATATAGTTGGTGATGCTATAAAGGTTGTTAGACGGTTTTCATTACCTGATGTTGGCAAGTGGGAACTTTCTAAAGATGCTGGAATATATCGTTTTCCAAGGGTTTCTTGTGCTGCAGCTTCAGCAGATGATGCAGATCTTGACCCTACTGTTGCTGAGCTTCCTCCAAAACCTTTACTGGAGAAACTGGCCAAGGAACTTCGATGGCGTTTGGGTCTTCGTCTATTCAACCTGGATATTATTCGCGAGTATGGAACAAGAAATCACTTTTACGTCATTGACATAAACTACTTCCCTGGATATGGCAAAATGCCAGAATACGAACACATATTTACAGACTTCCTGTTGAGCCTGGGGCAGGGGAAGTACAAGAAAAAATCGGGCTAA 1068 0.4316 MRLREDVPCKNDDVSAEKEELIEKDLTLPQNQWCPVLNAGFSSPKRLVVVGYALTTKKIKSFLQPKLEGLARNKGILFVAVDHNRPLSDQGPFDIVLHKVIIFPALNFLDYRQSHPEVTVLDPPDAIQHLRNRQYMLQAVADMNLSDSYGIVGVPRQLVIKRDALAIPELVNKAGLTLPLVAKPLVADGSAKSHELSLAYEKYSLQNLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVGKWELSKDAGIYRFPRVSCAAASADDADLDPTVAELPPKPLLEKLAKELRWRLGLRLFNLDIIREYGTRNHFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKKSG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01368 355 PIRSF ITPK 15 355 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Cca03g01368 355 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 49 127 IPR041429 -
Cca03g01368 355 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 148 343 IPR040464 -
Cca03g01368 355 Gene3D - 123 327 - -
Cca03g01368 355 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 123 329 - -
Cca03g01368 355 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 31 353 - -
Cca03g01368 355 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 31 353 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01368 Cca-Chr3 31860072 31864429 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01368 K00913 - gmx:100127409 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g01368 03 31860072 31864429 Cca03g01368 03 31860072 31864429 ECH