Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01365 ATGCCACGCTCTAAGAATGTCAAGTCGGAGGCTATGTTGGAAACTGTACAGGAGATTGGCATTTATATTCATAGGTTTCACAATCTTGACCTTTTTAAGCAGGGATGGTATCAAATTAAGATTACTGTGAGATGGGAGGACAGTGAAAATATAGCATTTGGAATTCCAGCTAGAATTGTTCAATATGAAGCTCCTGATTTGGATCCTAGCAATACATATGGTGCATGGAAGATCGATGATACAGATAATAGTTTCTCAACACAATCTTTTCGGATAAAATACGCTAGGCAGGATGTTCATTTATATTTGATGACCGTATTCAACTTATCCCGTAGTAAATTTGTGGATTTAGCTACAACTGCTGTTATTTTAAAGTTTGAGCTTTTATATACTCCCACAACTGAGAATGATGCTGACGAAGAAGCTTCTACGGAGGATTCTCCTGCTGCTATCCATGAATTTCGAATTCCTCCTAAAGCTCTTATAGGATTGCATTCGTATTGTCCTGTCCATTTTGATTCTTTACATACAGTGCTTGTTGATGTGAGTGTACATGTCAGTCTACTAAAAGCCATCCCAAAGTTGCCCAGCAATTCTGCCAACACCGAAGTCATTATTGATAAAAGTAATGACACAACGAATAAAGGCATTGACGAAGTTGCTTCTCTAGATATGAAAAATGTCATGCTTGTTAAAGCATTACAAATTGCTCGTGATATATTGCTTGAAGAACTACAAAAAATTAGCAATGCAATTAATGAAGCTTTAGATATTTCAGGGTTTGTGTCAATAATGAGTAATGCGAAGTTACTAAATTCTGTGCAGCAAGCAAATCCATTTCCTTTAGATGTTGATGTTGTAGGACAAGGGAAGCCTTCAAATGATCTCAAGGGAGGAAATGAAACTTCAGATTTCTTGAATGATGAAAAACTCCATTCACTGTCTCAAAATGAACTGCTGGACTGTTTTCATTCATTGGGAGATCAATTATTCTATTTATGGAAAATATTTTTAAAGTTTCATAGGGATAACAGAACAAAGATTCTAGGATTTTTACGTGATGCGTGGGTTAAGGATCGAAAAGTTGAATGGTCAATATGGATGTTGTATTCAAAGGTAGAGATGCCTCATCAGTATATAAACAATAACAATAAGAGTGATGAGTCTTCCAATCGTGTACACAGACGAGTTTCCACTTTATGGAAGTTACCTGATGAACCTCTTCAGACTGCAGCTACACGTGCCGAACTTCATCGGAAGAGCATCGAACAAATGCGGTTTAACAACCGCTCGATTCAAGACATGCAAATATTTGGAGATCCCTTGCGTACACCAATTGTGATTGTTGAACATGTGATGAATGTACCTCGACGTTGTCCAAGTGACAATTCTTTACTGAGAAATATTGGGGATATAGATTCAGATGGCTTACCAATTGGCCTCAACTCTGATAATATAAGCAAGAAATTAGCACCACAAAGTAATGCTCGTGTGTTGAAGATTGTTGTCTTTGTGCATGGGTTTCAGGGGCATCATCTAGATCTACGACTTGTCCGAAATCAATGGGTTTTGATAGATCCCAAAGTAGAATTTTTGATGTCAGAGGCAAATGAAGATAAAACATTTGGAGACTTCGGAGAGATGGGACATAGGCTAGCTAAGGAAGTTATTTCTTTTCTTAAAAGCAAATTGGACAAAGCATCAAAATTTGGGAATTTGCGAGATATTAGACTTAGTTTTGTTGGACATTCTATTGGTAACCTCATTATACGATCCGCGATAGCAGATAGCATAATGGAGCCATTTCTAAGACACCTACATACATATGTTTCGGTATCTGGTCCACACTTGGGGTATCTTTATAGTTCAAACTCATTGTTTAACTCTGGATTGTGGTTTTTGAAGAAGCTAAAAGGAACACAGTGCATTCATCAACTCACTTTCACGGATGATCCAGATCTCCAAAATACATTTCTCTATAAATTGAGTAAGCAGAAGACCTTAGAACATTTTAAGAATATTATCCTGCTATCTTCCCCTCAGGATGGTTATGTTCCTTACCATTCTGCTAGAATTGAATCATGCCAAGCTGCTTCACGTGACACTTCAAAGAAGGGTAAAATATTCTCGGAGATGTTGGATGATTGTTTGGACCAAATTCGTGCCAACTCCACGGAACATCGAGTTTTCATGCGTTGTGATGTCAACTTTGATGCATCTACTCAAGGCAAAAATTTGGACTCCATAATTGGTCGGGCTGCACATATTGAATTTTTGGATTCTGACATATTCGCGAGGTTCATAATGTGGTCATTCCCAAATCTTTTTCGATAG 2334 0.3762 MPRSKNVKSEAMLETVQEIGIYIHRFHNLDLFKQGWYQIKITVRWEDSENIAFGIPARIVQYEAPDLDPSNTYGAWKIDDTDNSFSTQSFRIKYARQDVHLYLMTVFNLSRSKFVDLATTAVILKFELLYTPTTENDADEEASTEDSPAAIHEFRIPPKALIGLHSYCPVHFDSLHTVLVDVSVHVSLLKAIPKLPSNSANTEVIIDKSNDTTNKGIDEVASLDMKNVMLVKALQIARDILLEELQKISNAINEALDISGFVSIMSNAKLLNSVQQANPFPLDVDVVGQGKPSNDLKGGNETSDFLNDEKLHSLSQNELLDCFHSLGDQLFYLWKIFLKFHRDNRTKILGFLRDAWVKDRKVEWSIWMLYSKVEMPHQYINNNNKSDESSNRVHRRVSTLWKLPDEPLQTAATRAELHRKSIEQMRFNNRSIQDMQIFGDPLRTPIVIVEHVMNVPRRCPSDNSLLRNIGDIDSDGLPIGLNSDNISKKLAPQSNARVLKIVVFVHGFQGHHLDLRLVRNQWVLIDPKVEFLMSEANEDKTFGDFGEMGHRLAKEVISFLKSKLDKASKFGNLRDIRLSFVGHSIGNLIIRSAIADSIMEPFLRHLHTYVSVSGPHLGYLYSSNSLFNSGLWFLKKLKGTQCIHQLTFTDDPDLQNTFLYKLSKQKTLEHFKNIILLSSPQDGYVPYHSARIESCQAASRDTSKKGKIFSEMLDDCLDQIRANSTEHRVFMRCDVNFDASTQGKNLDSIIGRAAHIEFLDSDIFARFIMWSFPNLFR 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01365 777 Gene3D alpha/beta hydrolase 500 716 IPR029058 -
Cca03g01365 777 SUPERFAMILY alpha/beta-Hydrolases 501 693 IPR029058 -
Cca03g01365 777 Pfam Putative serine esterase (DUF676) 499 696 IPR007751 -
Cca03g01365 777 Pfam Protein FAM135 124 188 IPR022122 -
Cca03g01365 777 PANTHER UNCHARACTERIZED 8 777 IPR044294 -
Cca03g01365 777 Coils Coil 231 251 - -
Cca03g01365 777 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 8 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01365 Cca-Chr3 31795622 31805133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01365 - - gmx:100785285 1309.66