Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g01345 ATGGAGATTGAGGACACATCAAGTGGAGTGTCTATTGGGTTTCCTCTTGGTTTAGCTCTTCTCGTTGTCTTGTTATTGTTCATGTGCTGCTTCTTTTGCTGCTGCTTGCATTGGGAAAAGCTCCAACCCATGTTTCCTTTTTCTGGAGTTATCAACACTCATGACCCTCACACACCACCACACTTAACTCCCCCTCATCACAAACCGGGCTTTCCTGTCTTGATGCTGAAGCATAAGGGAGGTGAGAGCTTGCCCGTTCTGATGCCAGGAGATGAGGTTCCAAGGTTCATAGCCTTAGCATGCCCATGTCAGCCTCCAACAAATGAAAGAATCACAATCCATGTGCAGAAGGCATCATCAAATGGTTATTGTGGCGGTGCATGA 384 0.4688 MEIEDTSSGVSIGFPLGLALLVVLLLFMCCFFCCCLHWEKLQPMFPFSGVINTHDPHTPPHLTPPHHKPGFPVLMLKHKGGESLPVLMPGDEVPRFIALACPCQPPTNERITIHVQKASSNGYCGGA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g01345 127 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 121 IPR037699 -
Cca03g01345 127 PANTHER PROTEIN, PUTATIVE-RELATED 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g01345 Cca-Chr3 31489587 31490747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g01345 - - ccaj:109815734 238.039